Protein–RNA interactions for Protein: Q08471

MSA1, G1-specific transcription factors activator MSA1, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSA1Q08471 KAP122YGL016W 3246 nt1.06□□□□□ -2.24
MSA1Q08471 RAD9YDR217C 3930 nt1.06□□□□□ -2.24
MSA1Q08471 tR(UCU)Q1tR(UCU)Q1 73 nt1.06□□□□□ -2.24
MSA1Q08471 CIC1YHR052W 1131 nt1.06□□□□□ -2.24
MSA1Q08471 RRT15YLR162W-A 189 nt1.06□□□□□ -2.24
MSA1Q08471 GMC2YLR445W 567 nt1.06□□□□□ -2.24
MSA1Q08471 YOL159CYOL159C 516 nt1.06□□□□□ -2.24
MSA1Q08471 SEC3YER008C 4011 nt1.06□□□□□ -2.24
MSA1Q08471 PPN1YDR452W 2025 nt1.06□□□□□ -2.24
MSA1Q08471 IML1YJR138W 4755 nt1.05□□□□□ -2.24
MSA1Q08471 SMC4YLR086W 4257 nt1.05□□□□□ -2.24
MSA1Q08471 CDC36YDL165W 576 nt1.05□□□□□ -2.24
MSA1Q08471 YJR079WYJR079W 330 nt1.05□□□□□ -2.24
MSA1Q08471 CTK3YML112W 891 nt1.05□□□□□ -2.24
MSA1Q08471 DDR48YMR173W 1293 nt1.05□□□□□ -2.24
MSA1Q08471 YOR248WYOR248W 303 nt1.05□□□□□ -2.24
MSA1Q08471 YBR071WYBR071W 636 nt1.05□□□□□ -2.24
MSA1Q08471 YPR146CYPR146C 330 nt1.05□□□□□ -2.24
MSA1Q08471 ZIP1YDR285W 2628 nt1.05□□□□□ -2.24
MSA1Q08471 ZRG17YNR039C 1818 nt1.05□□□□□ -2.24
MSA1Q08471 CDC25YLR310C 4770 nt1.05□□□□□ -2.24
MSA1Q08471 HDA3YPR179C 1968 nt1.05□□□□□ -2.24
MSA1Q08471 YDL152WYDL152W 366 nt1.04□□□□□ -2.24
MSA1Q08471 YDR169C-AYDR169C-A 150 nt1.04□□□□□ -2.24
MSA1Q08471 YFL012WYFL012W 447 nt1.04□□□□□ -2.24
MSA1Q08471 YIL020C-AYIL020C-A 339 nt1.04□□□□□ -2.24
MSA1Q08471 BER1YLR412W 825 nt1.04□□□□□ -2.24
MSA1Q08471 YBL029C-AYBL029C-A 285 nt1.04□□□□□ -2.24
MSA1Q08471 TIM18YOR297C 579 nt1.04□□□□□ -2.24
MSA1Q08471 YCL046WYCL046W 324 nt1.04□□□□□ -2.24
MSA1Q08471 RAD50YNL250W 3939 nt1.04□□□□□ -2.24
MSA1Q08471 PHR1YOR386W 1698 nt1.04□□□□□ -2.24
MSA1Q08471 SWI5YDR146C 2130 nt1.03□□□□□ -2.24
MSA1Q08471 tV(UAC)BtV(UAC)B 74 nt1.03□□□□□ -2.24
MSA1Q08471 tV(UAC)DtV(UAC)D 74 nt1.03□□□□□ -2.24
MSA1Q08471 YNL114CYNL114C 372 nt1.03□□□□□ -2.24
MSA1Q08471 YOR032W-AYOR032W-A 201 nt1.03□□□□□ -2.24
MSA1Q08471 YOR161W-BYOR161W-B 261 nt1.03□□□□□ -2.24
MSA1Q08471 YOR192C-AYOR192C-A 1317 nt1.03□□□□□ -2.24
MSA1Q08471 SPR3YGR059W 1539 nt1.03□□□□□ -2.24
MSA1Q08471 CLU1YMR012W 3834 nt1.03□□□□□ -2.25
MSA1Q08471 COG4YPR105C 2586 nt1.02□□□□□ -2.25
MSA1Q08471 QCR7YDR529C 384 nt1.02□□□□□ -2.25
MSA1Q08471 PHS1YJL097W 654 nt1.02□□□□□ -2.25
MSA1Q08471 RPL40BYKR094C 387 nt1.02□□□□□ -2.25
MSA1Q08471 SGO1YOR073W 1773 nt1.02□□□□□ -2.25
MSA1Q08471 RPS30BYOR182C 192 nt1.02□□□□□ -2.25
MSA1Q08471 SVS1YPL163C 783 nt1.02□□□□□ -2.25
MSA1Q08471 YDL211CYDL211C 1119 nt1.01□□□□□ -2.25
MSA1Q08471 ILM1YJR118C 612 nt1.01□□□□□ -2.25
MSA1Q08471 RPL9BYNL067W 576 nt1.01□□□□□ -2.25
MSA1Q08471 YPR063CYPR063C 423 nt1.01□□□□□ -2.25
MSA1Q08471 YPR099CYPR099C 357 nt1.01□□□□□ -2.25
MSA1Q08471 TOF2YKR010C 2316 nt1.01□□□□□ -2.25
MSA1Q08471 PAN3YKL025C 2040 nt1□□□□□ -2.25
MSA1Q08471 VPS54YDR027C 2670 nt1□□□□□ -2.25
MSA1Q08471 OCA6YDR067C 675 nt1□□□□□ -2.25
MSA1Q08471 MET32YDR253C 576 nt1□□□□□ -2.25
MSA1Q08471 YGR283CYGR283C 1026 nt1□□□□□ -2.25
MSA1Q08471 YKL044WYKL044W 321 nt1□□□□□ -2.25
MSA1Q08471 NOP15YNL110C 663 nt1□□□□□ -2.25
MSA1Q08471 SLX4YLR135W 2247 nt0.99□□□□□ -2.25
MSA1Q08471 PRM8YGL053W 714 nt0.99□□□□□ -2.25
MSA1Q08471 YGL217CYGL217C 342 nt0.99□□□□□ -2.25
MSA1Q08471 YPR039WYPR039W 336 nt0.99□□□□□ -2.25
MSA1Q08471 YSY6YBR162W-A 198 nt0.99□□□□□ -2.25
MSA1Q08471 YJR029WYJR029W 5268 nt0.99□□□□□ -2.25
MSA1Q08471 YPR137C-BYPR137C-B 5268 nt0.99□□□□□ -2.25
MSA1Q08471 GDS1YOR355W 1569 nt0.99□□□□□ -2.25
MSA1Q08471 YHL009W-AYHL009W-A 1242 nt0.98□□□□□ -2.25
MSA1Q08471 YHR028W-AYHR028W-A 321 nt0.98□□□□□ -2.25
MSA1Q08471 YBR032WYBR032W 303 nt0.98□□□□□ -2.25
MSA1Q08471 YBR121C-AYBR121C-A 159 nt0.98□□□□□ -2.25
MSA1Q08471 OST1YJL002C 1431 nt0.98□□□□□ -2.25
MSA1Q08471 YDL016CYDL016C 303 nt0.97□□□□□ -2.25
MSA1Q08471 INA22YIR024C 651 nt0.97□□□□□ -2.25
MSA1Q08471 YKL123WYKL123W 381 nt0.97□□□□□ -2.25
MSA1Q08471 NOC3YLR002C 1992 nt0.97□□□□□ -2.25
MSA1Q08471 NUP145YGL092W 3954 nt0.96□□□□□ -2.26
MSA1Q08471 SWI6YLR182W 2412 nt0.96□□□□□ -2.26
MSA1Q08471 YKL068W-AYKL068W-A 237 nt0.96□□□□□ -2.26
MSA1Q08471 YLL020CYLL020C 306 nt0.96□□□□□ -2.26
MSA1Q08471 YOP1YPR028W 543 nt0.96□□□□□ -2.26
MSA1Q08471 IRC16YPR038W 360 nt0.96□□□□□ -2.26
MSA1Q08471 AIM44YPL158C 2277 nt0.96□□□□□ -2.26
MSA1Q08471 SIP4YJL089W 2490 nt0.96□□□□□ -2.26
MSA1Q08471 YDR509WYDR509W 348 nt0.95□□□□□ -2.26
MSA1Q08471 QCR9YGR183C 201 nt0.95□□□□□ -2.26
MSA1Q08471 YJR141WYJR141W 1044 nt0.95□□□□□ -2.26
MSA1Q08471 ISF1YMR081C 1017 nt0.95□□□□□ -2.26
MSA1Q08471 HCH1YNL281W 462 nt0.95□□□□□ -2.26
MSA1Q08471 GAL7YBR018C 1101 nt0.95□□□□□ -2.26
MSA1Q08471 YDR003W-AYDR003W-A 123 nt0.94□□□□□ -2.26
MSA1Q08471 YDR114CYDR114C 303 nt0.94□□□□□ -2.26
MSA1Q08471 TMA22YJR014W 597 nt0.94□□□□□ -2.26
MSA1Q08471 SWI4YER111C 3282 nt0.94□□□□□ -2.26
MSA1Q08471 MDS3YGL197W 4464 nt0.93□□□□□ -2.26
MSA1Q08471 YLR146W-AYLR146W-A 189 nt0.93□□□□□ -2.26
MSA1Q08471 RPL33BYOR234C 324 nt0.93□□□□□ -2.26
MSA1Q08471 YCS4YLR272C 3531 nt0.93□□□□□ -2.26
Retrieved 100 of 7,029 protein–RNA pairs in 49.6 ms