Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 KRI1-206ENST00000537363 2255 ntTSL 512.73□□□□□ -0.372e-6■■■□□ 14.7
SRSF1Q07955 KRI1-209ENST00000539027 582 ntTSL 510.85□□□□□ -0.672e-6■■■□□ 14.7
SRSF1Q07955 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.892e-6■■■□□ 14.7
SRSF1Q07955 KRI1-204ENST00000536689 3744 ntTSL 29.26□□□□□ -0.932e-6■■■□□ 14.7
SRSF1Q07955 CHTF18-209ENST00000479976 1110 ntTSL 227.23■■□□□ 1.953e-9■■■□□ 14.7
SRSF1Q07955 TEAD4-207ENST00000543035 801 ntTSL 524.63■■□□□ 1.532e-8■■■□□ 14.7
SRSF1Q07955 CHTF18-214ENST00000563545 569 ntTSL 521.59■■□□□ 1.052e-8■■■□□ 14.7
SRSF1Q07955 CHTF18-219ENST00000570058 471 ntTSL 221.59■■□□□ 1.052e-8■■■□□ 14.7
SRSF1Q07955 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.37■■□□□ 1.012e-8■■■□□ 14.7
SRSF1Q07955 SAE1-211ENST00000600753 483 ntTSL 421.14■□□□□ 0.972e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-206ENST00000540314 578 ntTSL 417.3■□□□□ 0.362e-8■■■□□ 14.7
SRSF1Q07955 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.352e-8■■■□□ 14.7
SRSF1Q07955 SAE1-208ENST00000597808 570 ntTSL 216.45■□□□□ 0.222e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.36■□□□□ 0.212e-8■■■□□ 14.7
SRSF1Q07955 SAE1-204ENST00000414294 2211 ntTSL 215.66■□□□□ 0.12e-8■■■□□ 14.7
SRSF1Q07955 SAE1-205ENST00000594144 723 ntTSL 315.53■□□□□ 0.082e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-205ENST00000536826 570 ntTSL 415.53■□□□□ 0.082e-8■■■□□ 14.7
SRSF1Q07955 SRRT-209ENST00000474896 726 ntTSL 315.53■□□□□ 0.082e-8■■■□□ 14.7
SRSF1Q07955 SNRNP48-203ENST00000634363 781 ntTSL 215.37■□□□□ 0.051e-8■■■□□ 14.7
SRSF1Q07955 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.16■□□□□ 0.022e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-8■■■□□ 14.7
SRSF1Q07955 SAE1-207ENST00000596995 2106 ntTSL 214.81□□□□□ -0.042e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.08□□□□□ -0.162e-8■■■□□ 14.7
SRSF1Q07955 TFB1M-204ENST00000470239 433 ntTSL 313.32□□□□□ -0.282e-8■■■□□ 14.7
SRSF1Q07955 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.29□□□□□ -0.282e-8■■■□□ 14.7
SRSF1Q07955 TEAD4-204ENST00000443986 641 ntTSL 313.06□□□□□ -0.322e-8■■■□□ 14.7
SRSF1Q07955 SAE1-206ENST00000594526 709 ntTSL 311.77□□□□□ -0.532e-8■■■□□ 14.7
SRSF1Q07955 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.632e-8■■■□□ 14.7
SRSF1Q07955 TFB1M-201ENST00000367166 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.662e-8■■■□□ 14.7
SRSF1Q07955 SGK2-209ENST00000496343 2395 ntTSL 1 (best)10.84□□□□□ -0.672e-8■■■□□ 14.7
SRSF1Q07955 SGK2-202ENST00000373077 1736 ntTSL 1 (best)10.54□□□□□ -0.722e-8■■■□□ 14.7
SRSF1Q07955 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.732e-8■■■□□ 14.7
SRSF1Q07955 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC10.04□□□□□ -0.82e-8■■■□□ 14.7
SRSF1Q07955 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.841e-8■■■□□ 14.7
SRSF1Q07955 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.912e-12■■■□□ 14.7
SRSF1Q07955 PRRC2C-208ENST00000476522 1931 ntTSL 59.3□□□□□ -0.922e-12■■■□□ 14.7
SRSF1Q07955 SAE1-210ENST00000600706 744 ntTSL 59.03□□□□□ -0.962e-8■■■□□ 14.7
SRSF1Q07955 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.042e-8■■■□□ 14.7
SRSF1Q07955 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.122e-8■■■□□ 14.7
SRSF1Q07955 PRRC2C-203ENST00000392078 1919 ntTSL 1 (best) BASIC7.94□□□□□ -1.142e-12■■■□□ 14.7
SRSF1Q07955 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.322e-12■■■□□ 14.7
SRSF1Q07955 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.52e-12■■■□□ 14.7
SRSF1Q07955 TFB1M-203ENST00000468889 621 ntTSL 33.3□□□□□ -1.882e-8■■■□□ 14.7
SRSF1Q07955 CDK5RAP3-218ENST00000580391 1957 ntTSL 512.13□□□□□ -0.474e-7■■■□□ 14.7
SRSF1Q07955 CDK5RAP3-212ENST00000579175 867 ntTSL 312.63□□□□□ -0.394e-7■■■□□ 14.7
SRSF1Q07955 PNISR-209ENST00000492294 652 ntTSL 36.76□□□□□ -1.338e-8■■■□□ 14.7
SRSF1Q07955 PNISR-210ENST00000498075 1027 ntTSL 1 (best)5.88□□□□□ -1.478e-8■■■□□ 14.7
SRSF1Q07955 PNISR-205ENST00000466057 2850 ntTSL 1 (best)4.7□□□□□ -1.668e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.179e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.049e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.039e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-221ENST00000523267 741 ntTSL 314.86□□□□□ -0.039e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.089e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-215ENST00000521299 868 ntTSL 514.58□□□□□ -0.089e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.48□□□□□ -0.099e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.239e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-206ENST00000518950 558 ntTSL 412.14□□□□□ -0.479e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.59e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-219ENST00000522663 2879 ntTSL 1 (best)10.1□□□□□ -0.799e-8■■■□□ 14.7
SRSF1Q07955 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.279e-8■■■□□ 14.7
SRSF1Q07955 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.54■■□□□ 1.22e-6■■■□□ 14.7
SRSF1Q07955 TMEM165-205ENST00000508404 1657 ntTSL 217.01■□□□□ 0.312e-6■■■□□ 14.7
SRSF1Q07955 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.272e-6■■■□□ 14.7
SRSF1Q07955 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC10.17□□□□□ -0.786e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC10.17□□□□□ -0.786e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-205ENST00000599817 340 ntTSL 29.95□□□□□ -0.826e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-201ENST00000594027 294 ntTSL 39.57□□□□□ -0.886e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-204ENST00000598754 470 ntTSL 29.57□□□□□ -0.886e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-202ENST00000595673 304 ntTSL 39.41□□□□□ -0.96e-12■■■□□ 14.7
SRSF1Q07955 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.27□□□□□ -1.416e-12■■■□□ 14.7
SRSF1Q07955 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.58□□□□□ -1.526e-12■■■□□ 14.7
SRSF1Q07955 NDUFV1-209ENST00000527355 679 ntTSL 214.82□□□□□ -0.043e-14■■■□□ 14.7
SRSF1Q07955 NDUFV1-226ENST00000533919 774 ntTSL 314.82□□□□□ -0.043e-14■■■□□ 14.7
SRSF1Q07955 TPM1-232ENST00000561425 582 ntTSL 519.46■□□□□ 0.714e-10■■■□□ 14.7
SRSF1Q07955 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.93■□□□□ 0.622e-10■■■□□ 14.7
SRSF1Q07955 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.76■□□□□ 0.592e-10■■■□□ 14.7
SRSF1Q07955 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.46■□□□□ 0.552e-10■■■□□ 14.7
SRSF1Q07955 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.88■□□□□ 0.292e-10■■■□□ 14.7
SRSF1Q07955 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.88■□□□□ 0.292e-10■■■□□ 14.7
SRSF1Q07955 TPM1-214ENST00000558544 1399 ntTSL 515.63■□□□□ 0.092e-10■■■□□ 14.7
SRSF1Q07955 TPM1-211ENST00000558314 1031 ntTSL 1 (best)14.99□□□□□ -0.014e-10■■■□□ 14.7
SRSF1Q07955 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.064e-10■■■□□ 14.7
SRSF1Q07955 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.47□□□□□ -0.094e-10■■■□□ 14.7
SRSF1Q07955 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.27□□□□□ -0.124e-10■■■□□ 14.7
SRSF1Q07955 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.234e-10■■■□□ 14.7
SRSF1Q07955 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.47□□□□□ -0.254e-10■■■□□ 14.7
SRSF1Q07955 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.264e-10■■■□□ 14.7
SRSF1Q07955 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.36□□□□□ -0.274e-10■■■□□ 14.7
SRSF1Q07955 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.344e-10■■■□□ 14.7
SRSF1Q07955 TPM1-230ENST00000561266 671 ntTSL 312.89□□□□□ -0.354e-10■■■□□ 14.7
SRSF1Q07955 TPM1-228ENST00000560975 2855 ntTSL 512.84□□□□□ -0.354e-10■■■□□ 14.7
SRSF1Q07955 TPM1-215ENST00000558868 653 ntTSL 211.72□□□□□ -0.532e-10■■■□□ 14.7
SRSF1Q07955 TPM1-227ENST00000560970 1039 ntTSL 1 (best)10.58□□□□□ -0.724e-10■■■□□ 14.7
SRSF1Q07955 TPM1-212ENST00000558347 1525 ntTSL 59.65□□□□□ -0.864e-10■■■□□ 14.7
SRSF1Q07955 TPM1-221ENST00000559831 573 ntTSL 59.01□□□□□ -0.972e-10■■■□□ 14.7
SRSF1Q07955 LENG8-203ENST00000421200 594 ntTSL 314.67□□□□□ -0.068e-13■■■□□ 14.7
SRSF1Q07955 GTPBP2-203ENST00000419497 1394 ntTSL 214.73□□□□□ -0.052e-6■■■□□ 14.7
SRSF1Q07955 GTPBP2-204ENST00000432918 1850 ntTSL 311.31□□□□□ -0.62e-6■■■□□ 14.7
SRSF1Q07955 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.78□□□□□ -1.483e-12■■■□□ 14.6
SRSF1Q07955 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC10.88□□□□□ -0.673e-28■■■□□ 14.6
Retrieved 100 of 14,836 protein–RNA pairs in 159.4 ms