Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.92■□□□□ 0.14
CCL20P78556 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL20P78556 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL20P78556 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCL20P78556 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCL20P78556 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CCL20P78556 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCL20P78556 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL20P78556 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 CD72-202ENST00000378430 585 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL20P78556 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL20P78556 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.91■□□□□ 0.14
CCL20P78556 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.91■□□□□ 0.14
CCL20P78556 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCL20P78556 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.91■□□□□ 0.14
CCL20P78556 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCL20P78556 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCL20P78556 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CCL20P78556 AC020763.4-201ENST00000623414 4170 ntBASIC15.9■□□□□ 0.14
CCL20P78556 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL20P78556 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.9■□□□□ 0.14
CCL20P78556 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CCL20P78556 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.9■□□□□ 0.14
CCL20P78556 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CCL20P78556 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 AC104581.1-202ENST00000635932 2618 ntBASIC15.9■□□□□ 0.14
CCL20P78556 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CCL20P78556 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL20P78556 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CCL20P78556 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
CCL20P78556 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CCL20P78556 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCL20P78556 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.89■□□□□ 0.13
CCL20P78556 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.89■□□□□ 0.13
CCL20P78556 PCDHB18P-201ENST00000524813 2368 ntBASIC15.89■□□□□ 0.13
CCL20P78556 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCL20P78556 AC004987.1-201ENST00000428627 508 ntBASIC15.88■□□□□ 0.13
CCL20P78556 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL20P78556 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCL20P78556 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CCL20P78556 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.88■□□□□ 0.13
CCL20P78556 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
CCL20P78556 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCL20P78556 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.87■□□□□ 0.13
CCL20P78556 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.87■□□□□ 0.13
CCL20P78556 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCL20P78556 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms