Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PRAMEP78395 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.35■□□□□ 0.85
PRAMEP78395 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PRAMEP78395 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.35■□□□□ 0.85
PRAMEP78395 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 AC231657.2-201ENST00000624556 255 ntBASIC20.35■□□□□ 0.85
PRAMEP78395 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
PRAMEP78395 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 AC068338.2-201ENST00000563278 1430 ntBASIC20.35■□□□□ 0.85
PRAMEP78395 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PRAMEP78395 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PRAMEP78395 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEP78395 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.34■□□□□ 0.85
PRAMEP78395 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.34■□□□□ 0.85
PRAMEP78395 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEP78395 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.34■□□□□ 0.85
PRAMEP78395 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEP78395 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
PRAMEP78395 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEP78395 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PRAMEP78395 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PRAMEP78395 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PRAMEP78395 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEP78395 AC007322.1-201ENST00000426983 750 ntBASIC20.33■□□□□ 0.85
PRAMEP78395 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PRAMEP78395 RARRES2P4-201ENST00000514074 484 ntBASIC20.33■□□□□ 0.85
PRAMEP78395 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.33■□□□□ 0.85
PRAMEP78395 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.33■□□□□ 0.85
PRAMEP78395 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PRAMEP78395 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 AC087633.2-202ENST00000565166 1439 ntBASIC20.33■□□□□ 0.84
PRAMEP78395 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PRAMEP78395 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PRAMEP78395 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEP78395 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEP78395 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEP78395 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEP78395 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEP78395 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
PRAMEP78395 AL356652.1-201ENST00000615962 565 ntBASIC20.32■□□□□ 0.84
PRAMEP78395 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEP78395 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEP78395 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEP78395 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEP78395 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEP78395 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEP78395 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms