Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN2P57739 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
CLDN2P57739 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLDN2P57739 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLDN2P57739 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CLDN2P57739 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN2P57739 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN2P57739 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN2P57739 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CLDN2P57739 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN2P57739 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN2P57739 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN2P57739 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CLDN2P57739 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.02■□□□□ 0.8
CLDN2P57739 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN2P57739 Z99916.2-201ENST00000604037 246 ntBASIC20.02■□□□□ 0.8
CLDN2P57739 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN2P57739 PLK5-205ENST00000642079 1969 ntBASIC20.02■□□□□ 0.8
CLDN2P57739 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN2P57739 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.02■□□□□ 0.79
CLDN2P57739 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN2P57739 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CLDN2P57739 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.02■□□□□ 0.79
CLDN2P57739 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CLDN2P57739 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.01■□□□□ 0.79
CLDN2P57739 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CLDN2P57739 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN2P57739 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CLDN2P57739 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.01■□□□□ 0.79
CLDN2P57739 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.01■□□□□ 0.79
CLDN2P57739 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.01■□□□□ 0.79
CLDN2P57739 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
CLDN2P57739 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 HES2-206ENST00000489730 730 ntTSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20■□□□□ 0.79
CLDN2P57739 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20■□□□□ 0.79
CLDN2P57739 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20■□□□□ 0.79
CLDN2P57739 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
CLDN2P57739 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CLDN2P57739 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN2P57739 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CLDN2P57739 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CLDN2P57739 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 AC239809.2-201ENST00000415381 517 ntBASIC19.99■□□□□ 0.79
CLDN2P57739 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN2P57739 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN2P57739 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.99■□□□□ 0.79
CLDN2P57739 AC124016.1-201ENST00000609552 612 ntBASIC19.99■□□□□ 0.79
CLDN2P57739 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.99■□□□□ 0.79
CLDN2P57739 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CLDN2P57739 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CLDN2P57739 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CLDN2P57739 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN2P57739 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN2P57739 MIR718-201ENST00000390190 70 ntBASIC19.98■□□□□ 0.79
CLDN2P57739 KRASP1-201ENST00000407852 552 ntBASIC19.98■□□□□ 0.79
CLDN2P57739 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.98■□□□□ 0.79
CLDN2P57739 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN2P57739 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLDN2P57739 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.98■□□□□ 0.79
CLDN2P57739 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.98■□□□□ 0.79
CLDN2P57739 AC007375.3-201ENST00000600936 2314 ntBASIC19.98■□□□□ 0.79
CLDN2P57739 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms