Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SUMO3P55854 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SUMO3P55854 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.33■□□□□ 0.53
SUMO3P55854 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SUMO3P55854 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.33■□□□□ 0.52
SUMO3P55854 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.33■□□□□ 0.52
SUMO3P55854 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.33■□□□□ 0.52
SUMO3P55854 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.33■□□□□ 0.52
SUMO3P55854 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SUMO3P55854 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.33■□□□□ 0.52
SUMO3P55854 AC023632.3-201ENST00000521633 145 ntBASIC18.33■□□□□ 0.52
SUMO3P55854 AL138781.1-201ENST00000566567 1274 ntBASIC18.33■□□□□ 0.52
SUMO3P55854 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.33■□□□□ 0.52
SUMO3P55854 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SUMO3P55854 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.33■□□□□ 0.52
SUMO3P55854 AC133041.1-202ENST00000642053 222 ntBASIC18.33■□□□□ 0.52
SUMO3P55854 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SUMO3P55854 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.33■□□□□ 0.52
SUMO3P55854 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.32■□□□□ 0.52
SUMO3P55854 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 AL162377.1-201ENST00000618844 1793 ntBASIC18.32■□□□□ 0.52
SUMO3P55854 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SUMO3P55854 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 LINC01006-201ENST00000333319 2292 ntBASIC18.32■□□□□ 0.52
SUMO3P55854 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.32■□□□□ 0.52
SUMO3P55854 HLA-L-209ENST00000420110 1011 ntBASIC18.32■□□□□ 0.52
SUMO3P55854 AC069152.1-201ENST00000438030 544 ntBASIC18.32■□□□□ 0.52
SUMO3P55854 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.32■□□□□ 0.52
SUMO3P55854 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
SUMO3P55854 AL031963.3-201ENST00000606441 850 ntBASIC18.32■□□□□ 0.52
SUMO3P55854 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.32■□□□□ 0.52
SUMO3P55854 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SUMO3P55854 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.32■□□□□ 0.52
SUMO3P55854 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SUMO3P55854 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUMO3P55854 PTBP1P-201ENST00000554374 1601 ntBASIC18.31■□□□□ 0.52
SUMO3P55854 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
SUMO3P55854 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SUMO3P55854 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.31■□□□□ 0.52
SUMO3P55854 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUMO3P55854 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SUMO3P55854 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SUMO3P55854 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUMO3P55854 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.31■□□□□ 0.52
SUMO3P55854 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.31■□□□□ 0.52
SUMO3P55854 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.31■□□□□ 0.52
SUMO3P55854 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.31■□□□□ 0.52
SUMO3P55854 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.31■□□□□ 0.52
SUMO3P55854 AC097658.1-201ENST00000475555 843 ntBASIC18.31■□□□□ 0.52
SUMO3P55854 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SUMO3P55854 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.31■□□□□ 0.52
SUMO3P55854 MYC-209ENST00000641252 345 ntBASIC18.31■□□□□ 0.52
SUMO3P55854 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SUMO3P55854 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUMO3P55854 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.3■□□□□ 0.52
SUMO3P55854 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SUMO3P55854 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.3■□□□□ 0.52
SUMO3P55854 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SUMO3P55854 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.3■□□□□ 0.52
SUMO3P55854 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.3■□□□□ 0.52
SUMO3P55854 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
SUMO3P55854 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 AL157384.1-201ENST00000445995 2473 ntBASIC18.3■□□□□ 0.52
SUMO3P55854 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SUMO3P55854 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUMO3P55854 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
SUMO3P55854 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.29■□□□□ 0.52
SUMO3P55854 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUMO3P55854 HLA-G-202ENST00000376815 851 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms