Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 SEC63YOR254C 1992 nt1.75□□□□□ -2.13
RPT4P53549 GNT1YOR320C 1476 nt1.75□□□□□ -2.13
RPT4P53549 YMR247W-AYMR247W-A 144 nt1.74□□□□□ -2.13
RPT4P53549 YOR192C-CYOR192C-C 237 nt1.74□□□□□ -2.13
RPT4P53549 TFC8YPL007C 1767 nt1.74□□□□□ -2.13
RPT4P53549 IRE1YHR079C 3348 nt1.74□□□□□ -2.13
RPT4P53549 YGR250CYGR250C 2346 nt1.73□□□□□ -2.13
RPT4P53549 GDS1YOR355W 1569 nt1.73□□□□□ -2.13
RPT4P53549 YER076W-AYER076W-A 348 nt1.73□□□□□ -2.13
RPT4P53549 YER087C-AYER087C-A 552 nt1.73□□□□□ -2.13
RPT4P53549 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
RPT4P53549 MSH3YCR092C 3057 nt1.72□□□□□ -2.13
RPT4P53549 PAU3YCR104W 375 nt1.72□□□□□ -2.13
RPT4P53549 YLR287CYLR287C 1068 nt1.72□□□□□ -2.13
RPT4P53549 YML009C-AYML009C-A 327 nt1.72□□□□□ -2.13
RPT4P53549 VPS15YBR097W 4365 nt1.72□□□□□ -2.13
RPT4P53549 TOF2YKR010C 2316 nt1.72□□□□□ -2.13
RPT4P53549 YGR130CYGR130C 2451 nt1.72□□□□□ -2.13
RPT4P53549 YER088C-AYER088C-A 324 nt1.71□□□□□ -2.14
RPT4P53549 MCM22YJR135C 720 nt1.71□□□□□ -2.14
RPT4P53549 YKL063CYKL063C 504 nt1.71□□□□□ -2.14
RPT4P53549 MSC6YOR354C 2079 nt1.71□□□□□ -2.14
RPT4P53549 DIE2YGR227W 1578 nt1.71□□□□□ -2.14
RPT4P53549 TDA9YML081W 3756 nt1.71□□□□□ -2.14
RPT4P53549 TBS1YBR150C 3285 nt1.71□□□□□ -2.14
RPT4P53549 MKT1YNL085W 2493 nt1.71□□□□□ -2.14
RPT4P53549 YNL324WYNL324W 396 nt1.7□□□□□ -2.14
RPT4P53549 HSL1YKL101W 4557 nt1.7□□□□□ -2.14
RPT4P53549 PKH3YDR466W 2697 nt1.7□□□□□ -2.14
RPT4P53549 CTR9YOL145C 3234 nt1.7□□□□□ -2.14
RPT4P53549 YGL239CYGL239C 315 nt1.69□□□□□ -2.14
RPT4P53549 YLR264C-AYLR264C-A 117 nt1.69□□□□□ -2.14
RPT4P53549 RUF22RUF22 515 nt1.69□□□□□ -2.14
RPT4P53549 ERP4YOR016C 624 nt1.69□□□□□ -2.14
RPT4P53549 RLM1YPL089C 2031 nt1.69□□□□□ -2.14
RPT4P53549 YDR509WYDR509W 348 nt1.68□□□□□ -2.14
RPT4P53549 YHL009W-AYHL009W-A 1242 nt1.68□□□□□ -2.14
RPT4P53549 YLR222C-AYLR222C-A 231 nt1.68□□□□□ -2.14
RPT4P53549 YLR406C-AYLR406C-A 150 nt1.68□□□□□ -2.14
RPT4P53549 YBL071CYBL071C 309 nt1.68□□□□□ -2.14
RPT4P53549 FMP23YBR047W 528 nt1.68□□□□□ -2.14
RPT4P53549 YCL046WYCL046W 324 nt1.68□□□□□ -2.14
RPT4P53549 NOP53YPL146C 1368 nt1.68□□□□□ -2.14
RPT4P53549 CBS1YDL069C 690 nt1.67□□□□□ -2.14
RPT4P53549 RTT102YGR275W 474 nt1.67□□□□□ -2.14
RPT4P53549 PAU18YLL064C 363 nt1.67□□□□□ -2.14
RPT4P53549 TRX1YLR043C 312 nt1.67□□□□□ -2.14
RPT4P53549 YNL114CYNL114C 372 nt1.67□□□□□ -2.14
RPT4P53549 YBL073WYBL073W 312 nt1.67□□□□□ -2.14
RPT4P53549 PAU6YNR076W 363 nt1.67□□□□□ -2.14
RPT4P53549 IRR1YIL026C 3453 nt1.67□□□□□ -2.14
RPT4P53549 OSH6YKR003W 1347 nt1.66□□□□□ -2.14
RPT4P53549 MON2YNL297C 4911 nt1.66□□□□□ -2.14
RPT4P53549 PRM3YPL192C 402 nt1.66□□□□□ -2.14
RPT4P53549 HDA3YPR179C 1968 nt1.66□□□□□ -2.14
RPT4P53549 FRK1YPL141C 2598 nt1.66□□□□□ -2.14
RPT4P53549 PIP2YOR363C 2991 nt1.65□□□□□ -2.14
RPT4P53549 SWI5YDR146C 2130 nt1.65□□□□□ -2.15
RPT4P53549 YGR042WYGR042W 816 nt1.65□□□□□ -2.15
RPT4P53549 YHR028W-AYHR028W-A 321 nt1.65□□□□□ -2.15
RPT4P53549 YIL066W-AYIL066W-A 444 nt1.65□□□□□ -2.15
RPT4P53549 RPL32YBL092W 393 nt1.65□□□□□ -2.15
RPT4P53549 YPL182CYPL182C 384 nt1.65□□□□□ -2.15
RPT4P53549 RPL31AYDL075W 342 nt1.64□□□□□ -2.15
RPT4P53549 YDR008CYDR008C 351 nt1.64□□□□□ -2.15
RPT4P53549 SDH7YDR511W 402 nt1.64□□□□□ -2.15
RPT4P53549 VAR1Q0140 1197 nt1.64□□□□□ -2.15
RPT4P53549 YGR265WYGR265W 411 nt1.64□□□□□ -2.15
RPT4P53549 ABM1YJR108W 372 nt1.64□□□□□ -2.15
RPT4P53549 SAR1YPL218W 573 nt1.64□□□□□ -2.15
RPT4P53549 MEC1YBR136W 7107 nt1.64□□□□□ -2.15
RPT4P53549 PMD1YER132C 5262 nt1.64□□□□□ -2.15
RPT4P53549 AGA2YGL032C 264 nt1.63□□□□□ -2.15
RPT4P53549 UBC7YMR022W 498 nt1.63□□□□□ -2.15
RPT4P53549 ZRG17YNR039C 1818 nt1.63□□□□□ -2.15
RPT4P53549 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
RPT4P53549 MAK10YEL053C 2202 nt1.63□□□□□ -2.15
RPT4P53549 HMI1YOL095C 2121 nt1.63□□□□□ -2.15
RPT4P53549 YLR035C-AYLR035C-A 3468 nt1.63□□□□□ -2.15
RPT4P53549 UTP21YLR409C 2820 nt1.62□□□□□ -2.15
RPT4P53549 YDR114CYDR114C 303 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)E1tH(GUG)E1 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)E2tH(GUG)E2 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)G1tH(GUG)G1 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)G2tH(GUG)G2 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)HtH(GUG)H 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)KtH(GUG)K 72 nt1.62□□□□□ -2.15
RPT4P53549 tH(GUG)MtH(GUG)M 72 nt1.62□□□□□ -2.15
RPT4P53549 PHS1YJL097W 654 nt1.62□□□□□ -2.15
RPT4P53549 RPS27AYKL156W 249 nt1.62□□□□□ -2.15
RPT4P53549 LAA1YJL207C 6045 nt1.61□□□□□ -2.15
RPT4P53549 MSH5YDL154W 2706 nt1.6□□□□□ -2.15
RPT4P53549 WIP1YDR374W-A 270 nt1.6□□□□□ -2.15
RPT4P53549 TIM13YGR181W 318 nt1.6□□□□□ -2.15
RPT4P53549 MRPL50YNR022C 420 nt1.6□□□□□ -2.15
RPT4P53549 APL2YKL135C 2181 nt1.59□□□□□ -2.15
RPT4P53549 RPS24BYIL069C 408 nt1.59□□□□□ -2.15
RPT4P53549 SKI3YPR189W 4299 nt1.59□□□□□ -2.15
RPT4P53549 YBP1YBR216C 2025 nt1.59□□□□□ -2.16
RPT4P53549 KCS1YDR017C 3153 nt1.59□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms