Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.27■□□□□ 0.84
NUBP1P53384 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NUBP1P53384 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC20.27■□□□□ 0.84
NUBP1P53384 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.27■□□□□ 0.84
NUBP1P53384 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.27■□□□□ 0.84
NUBP1P53384 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NUBP1P53384 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NUBP1P53384 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.27■□□□□ 0.83
NUBP1P53384 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 IER3-202ENST00000376377 1350 ntBASIC20.26■□□□□ 0.83
NUBP1P53384 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NUBP1P53384 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.26■□□□□ 0.83
NUBP1P53384 TSPY5P-201ENST00000426936 936 ntBASIC20.26■□□□□ 0.83
NUBP1P53384 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.26■□□□□ 0.83
NUBP1P53384 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.26■□□□□ 0.83
NUBP1P53384 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 FAM87A-204ENST00000613235 858 ntBASIC20.26■□□□□ 0.83
NUBP1P53384 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.26■□□□□ 0.83
NUBP1P53384 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NUBP1P53384 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.25■□□□□ 0.83
NUBP1P53384 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.25■□□□□ 0.83
NUBP1P53384 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 AC092647.4-201ENST00000457211 535 ntBASIC20.25■□□□□ 0.83
NUBP1P53384 FAM86EP-206ENST00000510506 987 ntBASIC20.25■□□□□ 0.83
NUBP1P53384 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.25■□□□□ 0.83
NUBP1P53384 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.25■□□□□ 0.83
NUBP1P53384 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.25■□□□□ 0.83
NUBP1P53384 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 AP000240.1-201ENST00000609910 452 ntBASIC20.25■□□□□ 0.83
NUBP1P53384 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NUBP1P53384 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NUBP1P53384 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.25■□□□□ 0.83
NUBP1P53384 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 AC087742.1-201ENST00000575880 1738 ntBASIC20.24■□□□□ 0.83
NUBP1P53384 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.24■□□□□ 0.83
NUBP1P53384 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.24■□□□□ 0.83
NUBP1P53384 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.24■□□□□ 0.83
NUBP1P53384 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.24■□□□□ 0.83
NUBP1P53384 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.24■□□□□ 0.83
NUBP1P53384 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.24■□□□□ 0.83
NUBP1P53384 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.24■□□□□ 0.83
NUBP1P53384 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NUBP1P53384 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NUBP1P53384 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.23■□□□□ 0.83
NUBP1P53384 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NUBP1P53384 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.23■□□□□ 0.83
NUBP1P53384 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.23■□□□□ 0.83
NUBP1P53384 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.23■□□□□ 0.83
NUBP1P53384 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.23■□□□□ 0.83
NUBP1P53384 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NUBP1P53384 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms