Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 AC128676.1-201ENST00000454392 318 ntBASIC18.96■□□□□ 0.63
EFNA3P52797 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
EFNA3P52797 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
EFNA3P52797 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 AC073648.6-201ENST00000641589 218 ntBASIC18.96■□□□□ 0.63
EFNA3P52797 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
EFNA3P52797 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.96■□□□□ 0.63
EFNA3P52797 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.96■□□□□ 0.63
EFNA3P52797 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 AC007225.1-201ENST00000566331 1836 ntBASIC18.95■□□□□ 0.62
EFNA3P52797 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
EFNA3P52797 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.95■□□□□ 0.62
EFNA3P52797 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
EFNA3P52797 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.95■□□□□ 0.62
EFNA3P52797 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.95■□□□□ 0.62
EFNA3P52797 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.95■□□□□ 0.62
EFNA3P52797 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.95■□□□□ 0.62
EFNA3P52797 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.95■□□□□ 0.62
EFNA3P52797 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
EFNA3P52797 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
EFNA3P52797 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
EFNA3P52797 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.94■□□□□ 0.62
EFNA3P52797 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.94■□□□□ 0.62
EFNA3P52797 PTBP1P-201ENST00000554374 1601 ntBASIC18.94■□□□□ 0.62
EFNA3P52797 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EFNA3P52797 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 KRT18P29-201ENST00000397031 1267 ntBASIC18.94■□□□□ 0.62
EFNA3P52797 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.94■□□□□ 0.62
EFNA3P52797 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.94■□□□□ 0.62
EFNA3P52797 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
EFNA3P52797 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
EFNA3P52797 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.93■□□□□ 0.62
EFNA3P52797 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
EFNA3P52797 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
EFNA3P52797 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.93■□□□□ 0.62
EFNA3P52797 AC005829.2-201ENST00000571422 1056 ntBASIC18.93■□□□□ 0.62
EFNA3P52797 AC006557.6-201ENST00000623071 864 ntBASIC18.93■□□□□ 0.62
EFNA3P52797 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.93■□□□□ 0.62
EFNA3P52797 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EFNA3P52797 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.92■□□□□ 0.62
EFNA3P52797 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.92■□□□□ 0.62
EFNA3P52797 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
EFNA3P52797 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.92■□□□□ 0.62
EFNA3P52797 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.92■□□□□ 0.62
EFNA3P52797 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 RPS2P52-201ENST00000469610 820 ntBASIC18.92■□□□□ 0.62
EFNA3P52797 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.92■□□□□ 0.62
EFNA3P52797 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.92■□□□□ 0.62
EFNA3P52797 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EFNA3P52797 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EFNA3P52797 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EFNA3P52797 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
EFNA3P52797 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.91■□□□□ 0.62
EFNA3P52797 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms