Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A1P52655 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A1P52655 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 AC046158.3-201ENST00000624947 2558 ntBASIC19.81■□□□□ 0.76
GTF2A1P52655 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
GTF2A1P52655 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A1P52655 AL512408.1-201ENST00000569378 2000 ntBASIC19.81■□□□□ 0.76
GTF2A1P52655 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GTF2A1P52655 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A1P52655 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
GTF2A1P52655 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
GTF2A1P52655 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A1P52655 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 AL353803.4-201ENST00000565882 1934 ntBASIC19.8■□□□□ 0.76
GTF2A1P52655 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GTF2A1P52655 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 AC011551.1-201ENST00000614101 683 ntBASIC19.8■□□□□ 0.76
GTF2A1P52655 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A1P52655 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GTF2A1P52655 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A1P52655 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF2A1P52655 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF2A1P52655 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF2A1P52655 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.79■□□□□ 0.76
GTF2A1P52655 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.79■□□□□ 0.76
GTF2A1P52655 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GTF2A1P52655 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF2A1P52655 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
GTF2A1P52655 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF2A1P52655 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.78■□□□□ 0.76
GTF2A1P52655 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.78■□□□□ 0.76
GTF2A1P52655 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.78■□□□□ 0.76
GTF2A1P52655 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GTF2A1P52655 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
GTF2A1P52655 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.77■□□□□ 0.76
GTF2A1P52655 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GTF2A1P52655 NOC2LP2-201ENST00000407594 1944 ntBASIC19.77■□□□□ 0.76
GTF2A1P52655 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms