Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 YJR087WYJR087W 351 nt1.06□□□□□ -2.24
TRM9P49957 YLR252WYLR252W 306 nt1.06□□□□□ -2.24
TRM9P49957 SWS2YNL081C 432 nt1.06□□□□□ -2.24
TRM9P49957 YPR063CYPR063C 423 nt1.06□□□□□ -2.24
TRM9P49957 YSY6YBR162W-A 198 nt1.06□□□□□ -2.24
TRM9P49957 SEC3YER008C 4011 nt1.06□□□□□ -2.24
TRM9P49957 MDS3YGL197W 4464 nt1.06□□□□□ -2.24
TRM9P49957 GAL7YBR018C 1101 nt1.05□□□□□ -2.24
TRM9P49957 TIM18YOR297C 579 nt1.05□□□□□ -2.24
TRM9P49957 COG4YPR105C 2586 nt1.05□□□□□ -2.24
TRM9P49957 MSS11YMR164C 2277 nt1.04□□□□□ -2.24
TRM9P49957 ZRG17YNR039C 1818 nt1.04□□□□□ -2.24
TRM9P49957 YPR117WYPR117W 7470 nt1.04□□□□□ -2.24
TRM9P49957 YDL211CYDL211C 1119 nt1.04□□□□□ -2.24
TRM9P49957 AFB1YLR040C 675 nt1.04□□□□□ -2.24
TRM9P49957 YCL046WYCL046W 324 nt1.04□□□□□ -2.24
TRM9P49957 YLL054CYLL054C 2532 nt1.04□□□□□ -2.24
TRM9P49957 HDA3YPR179C 1968 nt1.03□□□□□ -2.24
TRM9P49957 YDL152WYDL152W 366 nt1.03□□□□□ -2.24
TRM9P49957 YHL009W-AYHL009W-A 1242 nt1.03□□□□□ -2.24
TRM9P49957 PRP21YJL203W 843 nt1.03□□□□□ -2.24
TRM9P49957 PAU18YLL064C 363 nt1.03□□□□□ -2.24
TRM9P49957 PAU6YNR076W 363 nt1.03□□□□□ -2.24
TRM9P49957 YPR146CYPR146C 330 nt1.03□□□□□ -2.24
TRM9P49957 SPR3YGR059W 1539 nt1.03□□□□□ -2.24
TRM9P49957 APL1YJR005W 2103 nt1.03□□□□□ -2.25
TRM9P49957 RAD50YNL250W 3939 nt1.02□□□□□ -2.25
TRM9P49957 YER188C-AYER188C-A 300 nt1.02□□□□□ -2.25
TRM9P49957 VMA21YGR105W 234 nt1.02□□□□□ -2.25
TRM9P49957 NBP1YLR457C 960 nt1.02□□□□□ -2.25
TRM9P49957 YNL114CYNL114C 372 nt1.02□□□□□ -2.25
TRM9P49957 SLM6YBR266C 453 nt1.02□□□□□ -2.25
TRM9P49957 SGO1YOR073W 1773 nt1.01□□□□□ -2.25
TRM9P49957 YJR029WYJR029W 5268 nt1.01□□□□□ -2.25
TRM9P49957 YPR137C-BYPR137C-B 5268 nt1.01□□□□□ -2.25
TRM9P49957 YGL217CYGL217C 342 nt1.01□□□□□ -2.25
TRM9P49957 FCF2YLR051C 654 nt1.01□□□□□ -2.25
TRM9P49957 RPS18BYML026C 441 nt1.01□□□□□ -2.25
TRM9P49957 VPS54YDR027C 2670 nt1.01□□□□□ -2.25
TRM9P49957 NST1YNL091W 3723 nt1□□□□□ -2.25
TRM9P49957 SLX4YLR135W 2247 nt1□□□□□ -2.25
TRM9P49957 YOR192C-AYOR192C-A 1317 nt1□□□□□ -2.25
TRM9P49957 SPT7YBR081C 3999 nt1□□□□□ -2.25
TRM9P49957 YKL023C-AYKL023C-A 228 nt1□□□□□ -2.25
TRM9P49957 YLL020CYLL020C 306 nt1□□□□□ -2.25
TRM9P49957 YNL050CYNL050C 813 nt1□□□□□ -2.25
TRM9P49957 RPL9BYNL067W 576 nt1□□□□□ -2.25
TRM9P49957 NOP15YNL110C 663 nt1□□□□□ -2.25
TRM9P49957 VAM6YDL077C 3150 nt0.99□□□□□ -2.25
TRM9P49957 YHR028W-AYHR028W-A 321 nt0.99□□□□□ -2.25
TRM9P49957 RPL34BYIL052C 366 nt0.99□□□□□ -2.25
TRM9P49957 PAM16YJL104W 450 nt0.99□□□□□ -2.25
TRM9P49957 YJR079WYJR079W 330 nt0.99□□□□□ -2.25
TRM9P49957 DDR48YMR173W 1293 nt0.99□□□□□ -2.25
TRM9P49957 YOR248WYOR248W 303 nt0.99□□□□□ -2.25
TRM9P49957 ZIP1YDR285W 2628 nt0.99□□□□□ -2.25
TRM9P49957 SWI4YER111C 3282 nt0.98□□□□□ -2.25
TRM9P49957 YHR214C-CYHR214C-C 1437 nt0.98□□□□□ -2.25
TRM9P49957 NUP188YML103C 4968 nt0.98□□□□□ -2.25
TRM9P49957 GPM2YDL021W 936 nt0.98□□□□□ -2.25
TRM9P49957 HNT1YDL125C 477 nt0.98□□□□□ -2.25
TRM9P49957 QCR7YDR529C 384 nt0.98□□□□□ -2.25
TRM9P49957 PAU2YEL049W 363 nt0.98□□□□□ -2.25
TRM9P49957 YFR009W-AYFR009W-A 258 nt0.98□□□□□ -2.25
TRM9P49957 YIL029CYIL029C 429 nt0.98□□□□□ -2.25
TRM9P49957 YPR099CYPR099C 357 nt0.98□□□□□ -2.25
TRM9P49957 NUP145YGL092W 3954 nt0.98□□□□□ -2.25
TRM9P49957 SWI5YDR146C 2130 nt0.98□□□□□ -2.25
TRM9P49957 EAF1YDR359C 2949 nt0.98□□□□□ -2.25
TRM9P49957 GDS1YOR355W 1569 nt0.97□□□□□ -2.25
TRM9P49957 TMA22YJR014W 597 nt0.97□□□□□ -2.25
TRM9P49957 RTR1YER139C 681 nt0.96□□□□□ -2.26
TRM9P49957 GMC2YLR445W 567 nt0.96□□□□□ -2.26
TRM9P49957 RPS30BYOR182C 192 nt0.96□□□□□ -2.26
TRM9P49957 YBR071WYBR071W 636 nt0.96□□□□□ -2.26
TRM9P49957 PAN3YKL025C 2040 nt0.96□□□□□ -2.26
TRM9P49957 NUT1YGL151W 3399 nt0.95□□□□□ -2.26
TRM9P49957 PPN1YDR452W 2025 nt0.95□□□□□ -2.26
TRM9P49957 YOP1YPR028W 543 nt0.95□□□□□ -2.26
TRM9P49957 NOC3YLR002C 1992 nt0.94□□□□□ -2.26
TRM9P49957 TOF2YKR010C 2316 nt0.93□□□□□ -2.26
TRM9P49957 SPT21YMR179W 2277 nt0.93□□□□□ -2.26
TRM9P49957 YDR003W-AYDR003W-A 123 nt0.93□□□□□ -2.26
TRM9P49957 YDR509WYDR509W 348 nt0.93□□□□□ -2.26
TRM9P49957 PRM8YGL053W 714 nt0.93□□□□□ -2.26
TRM9P49957 YBR121C-AYBR121C-A 159 nt0.93□□□□□ -2.26
TRM9P49957 OST1YJL002C 1431 nt0.92□□□□□ -2.26
TRM9P49957 snR78snR78 87 nt0.92□□□□□ -2.26
TRM9P49957 INA22YIR024C 651 nt0.92□□□□□ -2.26
TRM9P49957 YBR032WYBR032W 303 nt0.92□□□□□ -2.26
TRM9P49957 ROM2YLR371W 4071 nt0.92□□□□□ -2.26
TRM9P49957 YDR008CYDR008C 351 nt0.91□□□□□ -2.26
TRM9P49957 YMR242W-AYMR242W-A 90 nt0.91□□□□□ -2.26
TRM9P49957 PIG1YLR273C 1947 nt0.91□□□□□ -2.26
TRM9P49957 YDR114CYDR114C 303 nt0.9□□□□□ -2.27
TRM9P49957 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
TRM9P49957 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
TRM9P49957 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
TRM9P49957 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
TRM9P49957 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms