Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 RIF1YBR275C 5751 nt2.55□□□□□ -2
NIT3P49954 YPL216WYPL216W 3309 nt2.54□□□□□ -2
NIT3P49954 CFT2YLR115W 2580 nt2.54□□□□□ -2
NIT3P49954 LCD1YDR499W 2244 nt2.54□□□□□ -2
NIT3P49954 SSQ1YLR369W 1974 nt2.54□□□□□ -2
NIT3P49954 PLC1YPL268W 2610 nt2.54□□□□□ -2
NIT3P49954 BPT1YLL015W 4680 nt2.53□□□□□ -2
NIT3P49954 SNF5YBR289W 2718 nt2.53□□□□□ -2
NIT3P49954 MET18YIL128W 3099 nt2.53□□□□□ -2.01
NIT3P49954 ECM29YHL030W 5607 nt2.53□□□□□ -2.01
NIT3P49954 ATG11YPR049C 3537 nt2.52□□□□□ -2.01
NIT3P49954 snR55snR55 98 nt2.52□□□□□ -2.01
NIT3P49954 YCR043CYCR043C 384 nt2.52□□□□□ -2.01
NIT3P49954 ERP6YGL002W 651 nt2.52□□□□□ -2.01
NIT3P49954 INP2YMR163C 2118 nt2.52□□□□□ -2.01
NIT3P49954 YNL198CYNL198C 303 nt2.52□□□□□ -2.01
NIT3P49954 YOR015WYOR015W 360 nt2.52□□□□□ -2.01
NIT3P49954 IES4YOR189W 351 nt2.52□□□□□ -2.01
NIT3P49954 snR43snR43 209 nt2.52□□□□□ -2.01
NIT3P49954 YCL023CYCL023C 348 nt2.52□□□□□ -2.01
NIT3P49954 TRS130YMR218C 3309 nt2.52□□□□□ -2.01
NIT3P49954 ILS1YBL076C 3219 nt2.52□□□□□ -2.01
NIT3P49954 YEF3YLR249W 3135 nt2.52□□□□□ -2.01
NIT3P49954 ZRG8YER033C 3231 nt2.51□□□□□ -2.01
NIT3P49954 SSS1YDR086C 243 nt2.51□□□□□ -2.01
NIT3P49954 GPG1YGL121C 381 nt2.51□□□□□ -2.01
NIT3P49954 YJL197C-AYJL197C-A 282 nt2.51□□□□□ -2.01
NIT3P49954 MBB1YJL199C 327 nt2.51□□□□□ -2.01
NIT3P49954 YLR120W-AYLR120W-A 102 nt2.51□□□□□ -2.01
NIT3P49954 PTP3YER075C 2787 nt2.51□□□□□ -2.01
NIT3P49954 SGM1YJR134C 2124 nt2.51□□□□□ -2.01
NIT3P49954 SLM1YIL105C 2061 nt2.51□□□□□ -2.01
NIT3P49954 VPS8YAL002W 3825 nt2.5□□□□□ -2.01
NIT3P49954 FAR11YNL127W 2862 nt2.5□□□□□ -2.01
NIT3P49954 MUK1YPL070W 1839 nt2.5□□□□□ -2.01
NIT3P49954 YGL052WYGL052W 306 nt2.5□□□□□ -2.01
NIT3P49954 INA22YIR024C 651 nt2.5□□□□□ -2.01
NIT3P49954 RPS29AYLR388W 171 nt2.5□□□□□ -2.01
NIT3P49954 YMR307C-AYMR307C-A 195 nt2.5□□□□□ -2.01
NIT3P49954 YNL028WYNL028W 318 nt2.5□□□□□ -2.01
NIT3P49954 CSE2YNR010W 450 nt2.5□□□□□ -2.01
NIT3P49954 YOR302WYOR302W 78 nt2.5□□□□□ -2.01
NIT3P49954 YLR278CYLR278C 4026 nt2.5□□□□□ -2.01
NIT3P49954 tF(GAA)QtF(GAA)Q 75 nt2.49□□□□□ -2.01
NIT3P49954 PAU8YAL068C 363 nt2.49□□□□□ -2.01
NIT3P49954 YLR154W-AYLR154W-A 186 nt2.49□□□□□ -2.01
NIT3P49954 YMR230W-AYMR230W-A 189 nt2.49□□□□□ -2.01
NIT3P49954 PAU20YOL161C 363 nt2.49□□□□□ -2.01
NIT3P49954 UBR1YGR184C 5853 nt2.48□□□□□ -2.01
NIT3P49954 TOP2YNL088W 4287 nt2.48□□□□□ -2.01
NIT3P49954 RFX1YLR176C 2436 nt2.48□□□□□ -2.01
NIT3P49954 PAU18YLL064C 363 nt2.48□□□□□ -2.01
NIT3P49954 COA4YLR218C 453 nt2.48□□□□□ -2.01
NIT3P49954 YLR294CYLR294C 330 nt2.48□□□□□ -2.01
NIT3P49954 COX14YML129C 213 nt2.48□□□□□ -2.01
NIT3P49954 PAU6YNR076W 363 nt2.48□□□□□ -2.01
NIT3P49954 TUS1YLR425W 3924 nt2.48□□□□□ -2.01
NIT3P49954 ISW1YBR245C 3390 nt2.48□□□□□ -2.01
NIT3P49954 PHO2YDL106C 1680 nt2.47□□□□□ -2.01
NIT3P49954 SWI6YLR182W 2412 nt2.47□□□□□ -2.01
NIT3P49954 VIK1YPL253C 1944 nt2.47□□□□□ -2.01
NIT3P49954 PAU2YEL049W 363 nt2.47□□□□□ -2.01
NIT3P49954 RPL33AYPL143W 324 nt2.47□□□□□ -2.01
NIT3P49954 SWA2YDR320C 2007 nt2.47□□□□□ -2.01
NIT3P49954 NIP100YPL174C 2607 nt2.47□□□□□ -2.01
NIT3P49954 TCB2YNL087W 3537 nt2.47□□□□□ -2.01
NIT3P49954 MPT5YGL178W 2580 nt2.47□□□□□ -2.01
NIT3P49954 NUP100YKL068W 2880 nt2.47□□□□□ -2.01
NIT3P49954 SKP2YNL311C 2292 nt2.46□□□□□ -2.02
NIT3P49954 SWI5YDR146C 2130 nt2.46□□□□□ -2.02
NIT3P49954 YJL135WYJL135W 318 nt2.46□□□□□ -2.02
NIT3P49954 YMR194C-AYMR194C-A 225 nt2.46□□□□□ -2.02
NIT3P49954 YMR321CYMR321C 318 nt2.46□□□□□ -2.02
NIT3P49954 KTI11YBL071W-A 249 nt2.46□□□□□ -2.02
NIT3P49954 LYS14YDR034C 2373 nt2.45□□□□□ -2.02
NIT3P49954 MNE1YOR350C 1992 nt2.45□□□□□ -2.02
NIT3P49954 RPS22AYJL190C 393 nt2.45□□□□□ -2.02
NIT3P49954 RPO41YFL036W 4056 nt2.45□□□□□ -2.02
NIT3P49954 ORC2YBR060C 1863 nt2.44□□□□□ -2.02
NIT3P49954 snR72snR72 98 nt2.44□□□□□ -2.02
NIT3P49954 PFD1YJL179W 330 nt2.44□□□□□ -2.02
NIT3P49954 RPS17AYML024W 411 nt2.44□□□□□ -2.02
NIT3P49954 COS111YBR203W 2775 nt2.44□□□□□ -2.02
NIT3P49954 SPT21YMR179W 2277 nt2.43□□□□□ -2.02
NIT3P49954 VTC3YPL019C 2508 nt2.42□□□□□ -2.02
NIT3P49954 YHR073W-AYHR073W-A 177 nt2.42□□□□□ -2.02
NIT3P49954 YIL174WYIL174W 228 nt2.42□□□□□ -2.02
NIT3P49954 YJL222W-AYJL222W-A 228 nt2.42□□□□□ -2.02
NIT3P49954 YCL046WYCL046W 324 nt2.42□□□□□ -2.02
NIT3P49954 KRE33YNL132W 3171 nt2.41□□□□□ -2.02
NIT3P49954 BUB1YGR188C 3066 nt2.41□□□□□ -2.02
NIT3P49954 PDE2YOR360C 1581 nt2.41□□□□□ -2.02
NIT3P49954 VPS54YDR027C 2670 nt2.41□□□□□ -2.02
NIT3P49954 ISD11YER048W-A 285 nt2.41□□□□□ -2.02
NIT3P49954 EMP24YGL200C 612 nt2.41□□□□□ -2.02
NIT3P49954 AI5_ALPHAQ0070 1893 nt2.41□□□□□ -2.02
NIT3P49954 AXL1YPR122W 3627 nt2.41□□□□□ -2.02
NIT3P49954 RPB10YOR210W 213 nt2.4□□□□□ -2.03
NIT3P49954 SIR3YLR442C 2937 nt2.4□□□□□ -2.03
NIT3P49954 SPC98YNL126W 2541 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 22.7 ms