Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.1■□□□□ 0.65
CLK3P49761 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.1■□□□□ 0.65
CLK3P49761 BID-214ENST00000617586 542 ntTSL 5 BASIC19.1■□□□□ 0.65
CLK3P49761 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLK3P49761 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.1■□□□□ 0.65
CLK3P49761 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLK3P49761 AC006015.1-201ENST00000429970 570 ntBASIC19.09■□□□□ 0.65
CLK3P49761 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.09■□□□□ 0.65
CLK3P49761 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.09■□□□□ 0.65
CLK3P49761 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.09■□□□□ 0.65
CLK3P49761 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.09■□□□□ 0.65
CLK3P49761 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CLK3P49761 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.09■□□□□ 0.65
CLK3P49761 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.09■□□□□ 0.65
CLK3P49761 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLK3P49761 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CLK3P49761 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLK3P49761 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.08■□□□□ 0.65
CLK3P49761 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLK3P49761 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CLK3P49761 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLK3P49761 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.08■□□□□ 0.65
CLK3P49761 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.08■□□□□ 0.64
CLK3P49761 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.08■□□□□ 0.64
CLK3P49761 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.08■□□□□ 0.64
CLK3P49761 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CLK3P49761 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.08■□□□□ 0.64
CLK3P49761 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.08■□□□□ 0.64
CLK3P49761 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLK3P49761 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLK3P49761 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.07■□□□□ 0.64
CLK3P49761 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 AC087289.5-201ENST00000586076 3175 ntBASIC19.07■□□□□ 0.64
CLK3P49761 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 AC243732.1-201ENST00000612648 864 ntBASIC19.07■□□□□ 0.64
CLK3P49761 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CLK3P49761 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLK3P49761 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.06■□□□□ 0.64
CLK3P49761 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLK3P49761 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.06■□□□□ 0.64
CLK3P49761 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.06■□□□□ 0.64
CLK3P49761 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.06■□□□□ 0.64
CLK3P49761 AC010536.3-201ENST00000620306 533 ntBASIC19.06■□□□□ 0.64
CLK3P49761 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms