Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HTR3AP46098 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.62■□□□□ 0.57
HTR3AP46098 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.62■□□□□ 0.57
HTR3AP46098 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.62■□□□□ 0.57
HTR3AP46098 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HTR3AP46098 AC231657.2-201ENST00000624556 255 ntBASIC18.62■□□□□ 0.57
HTR3AP46098 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HTR3AP46098 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
HTR3AP46098 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR3AP46098 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HTR3AP46098 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.61■□□□□ 0.57
HTR3AP46098 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR3AP46098 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.61■□□□□ 0.57
HTR3AP46098 DUX4L16-201ENST00000555130 1264 ntBASIC18.61■□□□□ 0.57
HTR3AP46098 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.61■□□□□ 0.57
HTR3AP46098 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HTR3AP46098 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HTR3AP46098 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HTR3AP46098 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTR3AP46098 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR3AP46098 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.6■□□□□ 0.57
HTR3AP46098 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTR3AP46098 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
HTR3AP46098 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.6■□□□□ 0.57
HTR3AP46098 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HTR3AP46098 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR3AP46098 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
HTR3AP46098 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HTR3AP46098 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HTR3AP46098 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.6■□□□□ 0.57
HTR3AP46098 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HTR3AP46098 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR3AP46098 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.59■□□□□ 0.57
HTR3AP46098 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.59■□□□□ 0.57
HTR3AP46098 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 PGM5P4-201ENST00000421970 445 ntBASIC18.59■□□□□ 0.57
HTR3AP46098 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.59■□□□□ 0.57
HTR3AP46098 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 AL137784.2-201ENST00000607332 1000 ntBASIC18.59■□□□□ 0.57
HTR3AP46098 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.59■□□□□ 0.57
HTR3AP46098 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HTR3AP46098 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HTR3AP46098 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HTR3AP46098 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTR3AP46098 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.58■□□□□ 0.57
HTR3AP46098 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HTR3AP46098 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HTR3AP46098 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
HTR3AP46098 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.58■□□□□ 0.56
HTR3AP46098 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.58■□□□□ 0.56
HTR3AP46098 AC007322.1-201ENST00000426983 750 ntBASIC18.58■□□□□ 0.56
HTR3AP46098 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.58■□□□□ 0.56
HTR3AP46098 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.58■□□□□ 0.56
HTR3AP46098 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HTR3AP46098 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.58■□□□□ 0.56
HTR3AP46098 MIR2861-201ENST00000636310 90 ntBASIC18.58■□□□□ 0.56
HTR3AP46098 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.58■□□□□ 0.56
HTR3AP46098 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms