Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 AP004607.4-201ENST00000530158 1459 ntBASIC17.35■□□□□ 0.37
CBX5P45973 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CBX5P45973 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.35■□□□□ 0.37
CBX5P45973 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
CBX5P45973 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
CBX5P45973 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CBX5P45973 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CBX5P45973 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CBX5P45973 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CBX5P45973 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CBX5P45973 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.34■□□□□ 0.37
CBX5P45973 AC112907.3-201ENST00000577781 2400 ntBASIC17.34■□□□□ 0.37
CBX5P45973 AC005224.4-201ENST00000583262 1652 ntBASIC17.34■□□□□ 0.37
CBX5P45973 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CBX5P45973 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.34■□□□□ 0.37
CBX5P45973 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX5P45973 SMG8-203ENST00000578922 2178 ntBASIC17.33■□□□□ 0.37
CBX5P45973 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CBX5P45973 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX5P45973 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CBX5P45973 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.33■□□□□ 0.36
CBX5P45973 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX5P45973 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.33■□□□□ 0.36
CBX5P45973 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.33■□□□□ 0.36
CBX5P45973 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.33■□□□□ 0.36
CBX5P45973 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CBX5P45973 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CBX5P45973 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 TCF3P1-201ENST00000423021 1937 ntBASIC17.32■□□□□ 0.36
CBX5P45973 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
CBX5P45973 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 GUSBP5-201ENST00000418136 578 ntBASIC17.32■□□□□ 0.36
CBX5P45973 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CBX5P45973 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBX5P45973 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CBX5P45973 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.31■□□□□ 0.36
CBX5P45973 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.31■□□□□ 0.36
CBX5P45973 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CBX5P45973 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.31■□□□□ 0.36
CBX5P45973 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.31■□□□□ 0.36
CBX5P45973 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX5P45973 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.31■□□□□ 0.36
CBX5P45973 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX5P45973 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX5P45973 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.31■□□□□ 0.36
CBX5P45973 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 AC120498.9-201ENST00000339021 3867 ntBASIC17.31■□□□□ 0.36
CBX5P45973 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 LTB4R2-202ENST00000528054 3092 ntBASIC17.31■□□□□ 0.36
CBX5P45973 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBX5P45973 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CBX5P45973 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBX5P45973 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBX5P45973 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms