Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFRSF4P43489 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF4P43489 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 NBPF21P-201ENST00000425093 1451 ntBASIC20.43■□□□□ 0.86
TNFRSF4P43489 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF4P43489 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF4P43489 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF4P43489 HLA-G-202ENST00000376815 851 ntBASIC20.43■□□□□ 0.86
TNFRSF4P43489 HLA-G-203ENST00000376818 1127 ntBASIC20.43■□□□□ 0.86
TNFRSF4P43489 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 AL121906.2-201ENST00000621597 723 ntBASIC20.43■□□□□ 0.86
TNFRSF4P43489 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.43■□□□□ 0.86
TNFRSF4P43489 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 AC012676.1-201ENST00000574705 1949 ntBASIC20.42■□□□□ 0.86
TNFRSF4P43489 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF4P43489 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.42■□□□□ 0.86
TNFRSF4P43489 AL024507.2-201ENST00000606070 2574 ntBASIC20.41■□□□□ 0.86
TNFRSF4P43489 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 AL353807.1-201ENST00000427475 662 ntBASIC20.41■□□□□ 0.86
TNFRSF4P43489 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 AC124283.5-201ENST00000624661 1809 ntBASIC20.41■□□□□ 0.86
TNFRSF4P43489 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF4P43489 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF4P43489 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TNFRSF4P43489 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.4■□□□□ 0.86
TNFRSF4P43489 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TNFRSF4P43489 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TNFRSF4P43489 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.4■□□□□ 0.86
TNFRSF4P43489 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.4■□□□□ 0.86
TNFRSF4P43489 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF4P43489 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms