Protein–RNA interactions for Protein: P40070

LSM4, U6 snRNA-associated Sm-like protein LSm4, yeastyeast

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM4P40070 SEF1YBL066C 3447 nt1.18□□□□□ -2.22
LSM4P40070 NUP145YGL092W 3954 nt1.17□□□□□ -2.22
LSM4P40070 BI2Q0110 1272 nt1.17□□□□□ -2.22
LSM4P40070 LSO2YGR169C-A 279 nt1.17□□□□□ -2.22
LSM4P40070 YJL015CYJL015C 285 nt1.17□□□□□ -2.22
LSM4P40070 YML108WYML108W 318 nt1.17□□□□□ -2.22
LSM4P40070 SNC2YOR327C 348 nt1.17□□□□□ -2.22
LSM4P40070 YPR039WYPR039W 336 nt1.17□□□□□ -2.22
LSM4P40070 MAK10YEL053C 2202 nt1.17□□□□□ -2.22
LSM4P40070 ZRG8YER033C 3231 nt1.17□□□□□ -2.22
LSM4P40070 MUD2YKL074C 1584 nt1.17□□□□□ -2.22
LSM4P40070 PPN1YDR452W 2025 nt1.16□□□□□ -2.22
LSM4P40070 YNL284C-BYNL284C-B 5268 nt1.16□□□□□ -2.22
LSM4P40070 KAR3YPR141C 2190 nt1.16□□□□□ -2.22
LSM4P40070 HMLALPHA2YCL067C 633 nt1.16□□□□□ -2.22
LSM4P40070 MATALPHA2YCR039C 633 nt1.16□□□□□ -2.22
LSM4P40070 AIM29YKR074W 468 nt1.16□□□□□ -2.22
LSM4P40070 YLR171WYLR171W 390 nt1.16□□□□□ -2.22
LSM4P40070 YOL159CYOL159C 516 nt1.16□□□□□ -2.22
LSM4P40070 GNT1YOR320C 1476 nt1.16□□□□□ -2.22
LSM4P40070 DAS1YJL149W 1992 nt1.16□□□□□ -2.22
LSM4P40070 CDC27YBL084C 2277 nt1.15□□□□□ -2.22
LSM4P40070 MMS22YLR320W 4365 nt1.15□□□□□ -2.22
LSM4P40070 YCR001WYCR001W 315 nt1.15□□□□□ -2.23
LSM4P40070 VPS20YMR077C 666 nt1.15□□□□□ -2.23
LSM4P40070 snR13snR13 124 nt1.15□□□□□ -2.23
LSM4P40070 RIC1YLR039C 3171 nt1.14□□□□□ -2.23
LSM4P40070 SGD1YLR336C 2700 nt1.14□□□□□ -2.23
LSM4P40070 snR79snR79 84 nt1.14□□□□□ -2.23
LSM4P40070 HUR1YGL168W 333 nt1.14□□□□□ -2.23
LSM4P40070 YGR025WYGR025W 303 nt1.14□□□□□ -2.23
LSM4P40070 INA22YIR024C 651 nt1.14□□□□□ -2.23
LSM4P40070 YLR269CYLR269C 351 nt1.14□□□□□ -2.23
LSM4P40070 TOM22YNL131W 459 nt1.14□□□□□ -2.23
LSM4P40070 PIP2YOR363C 2991 nt1.14□□□□□ -2.23
LSM4P40070 IRE1YHR079C 3348 nt1.14□□□□□ -2.23
LSM4P40070 MLH3YPL164C 2148 nt1.13□□□□□ -2.23
LSM4P40070 CDC25YLR310C 4770 nt1.13□□□□□ -2.23
LSM4P40070 YCR102W-AYCR102W-A 198 nt1.13□□□□□ -2.23
LSM4P40070 IES5YER092W 378 nt1.13□□□□□ -2.23
LSM4P40070 TSC3YBR058C-A 243 nt1.13□□□□□ -2.23
LSM4P40070 GPX2YBR244W 489 nt1.13□□□□□ -2.23
LSM4P40070 snR54snR54 86 nt1.13□□□□□ -2.23
LSM4P40070 YGR250CYGR250C 2346 nt1.13□□□□□ -2.23
LSM4P40070 VPS54YDR027C 2670 nt1.13□□□□□ -2.23
LSM4P40070 EST2YLR318W 2655 nt1.13□□□□□ -2.23
LSM4P40070 RSM22YKL155C 1887 nt1.13□□□□□ -2.23
LSM4P40070 NCA2YPR155C 1851 nt1.13□□□□□ -2.23
LSM4P40070 NOT5YPR072W 1683 nt1.13□□□□□ -2.23
LSM4P40070 ALK1YGL021W 2283 nt1.13□□□□□ -2.23
LSM4P40070 YOR192C-AYOR192C-A 1317 nt1.13□□□□□ -2.23
LSM4P40070 YLR149CYLR149C 2193 nt1.13□□□□□ -2.23
LSM4P40070 YHR125WYHR125W 306 nt1.12□□□□□ -2.23
LSM4P40070 YJL022WYJL022W 309 nt1.12□□□□□ -2.23
LSM4P40070 TIF11YMR260C 462 nt1.12□□□□□ -2.23
LSM4P40070 MSS11YMR164C 2277 nt1.12□□□□□ -2.23
LSM4P40070 ECL1YGR146C 636 nt1.11□□□□□ -2.23
LSM4P40070 YHR139C-AYHR139C-A 312 nt1.11□□□□□ -2.23
LSM4P40070 NBL1YHR199C-A 222 nt1.11□□□□□ -2.23
LSM4P40070 YJL007CYJL007C 315 nt1.11□□□□□ -2.23
LSM4P40070 RPS18BYML026C 441 nt1.11□□□□□ -2.23
LSM4P40070 EGD1YPL037C 474 nt1.11□□□□□ -2.23
LSM4P40070 YPR146CYPR146C 330 nt1.11□□□□□ -2.23
LSM4P40070 YSY6YBR162W-A 198 nt1.11□□□□□ -2.23
LSM4P40070 snR41snR41 95 nt1.11□□□□□ -2.23
LSM4P40070 YBR224WYBR224W 516 nt1.11□□□□□ -2.23
LSM4P40070 KAP122YGL016W 3246 nt1.11□□□□□ -2.23
LSM4P40070 SPC98YNL126W 2541 nt1.11□□□□□ -2.23
LSM4P40070 tF(GAA)BtF(GAA)B 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)FtF(GAA)F 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)GtF(GAA)G 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)H1tF(GAA)H1 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)H2tF(GAA)H2 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)MtF(GAA)M 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)P1tF(GAA)P1 73 nt1.1□□□□□ -2.23
LSM4P40070 tF(GAA)P2tF(GAA)P2 73 nt1.1□□□□□ -2.23
LSM4P40070 YER135CYER135C 393 nt1.1□□□□□ -2.23
LSM4P40070 FCF2YLR051C 654 nt1.1□□□□□ -2.23
LSM4P40070 PGA1YNL158W 597 nt1.1□□□□□ -2.23
LSM4P40070 CDC33YOL139C 642 nt1.1□□□□□ -2.23
LSM4P40070 MSC6YOR354C 2079 nt1.1□□□□□ -2.23
LSM4P40070 RAD9YDR217C 3930 nt1.09□□□□□ -2.23
LSM4P40070 YDR169C-AYDR169C-A 150 nt1.09□□□□□ -2.23
LSM4P40070 QCR7YDR529C 384 nt1.09□□□□□ -2.23
LSM4P40070 YER088C-AYER088C-A 324 nt1.09□□□□□ -2.23
LSM4P40070 RRT15YLR162W-A 189 nt1.09□□□□□ -2.23
LSM4P40070 YBL083CYBL083C 426 nt1.09□□□□□ -2.23
LSM4P40070 MNL2YLR057W 2550 nt1.09□□□□□ -2.24
LSM4P40070 PEP3YLR148W 2757 nt1.09□□□□□ -2.24
LSM4P40070 ZRG17YNR039C 1818 nt1.08□□□□□ -2.24
LSM4P40070 YCR043CYCR043C 384 nt1.08□□□□□ -2.24
LSM4P40070 YER023C-AYER023C-A 213 nt1.08□□□□□ -2.24
LSM4P40070 tV(UAC)BtV(UAC)B 74 nt1.08□□□□□ -2.24
LSM4P40070 tV(UAC)DtV(UAC)D 74 nt1.08□□□□□ -2.24
LSM4P40070 VPS55YJR044C 423 nt1.08□□□□□ -2.24
LSM4P40070 NFU1YKL040C 771 nt1.08□□□□□ -2.24
LSM4P40070 YLR101CYLR101C 396 nt1.08□□□□□ -2.24
LSM4P40070 YPL205CYPL205C 345 nt1.08□□□□□ -2.24
LSM4P40070 YBR121C-AYBR121C-A 159 nt1.08□□□□□ -2.24
LSM4P40070 YER006C-AYER006C-A 318 nt1.07□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms