Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 AXL1YPR122W 3627 nt2.63□□□□□ -1.99
RSP5P39940 SRB8YCR081W 4284 nt2.63□□□□□ -1.99
RSP5P39940 VPS8YAL002W 3825 nt2.63□□□□□ -1.99
RSP5P39940 COS111YBR203W 2775 nt2.63□□□□□ -1.99
RSP5P39940 YIL102CYIL102C 306 nt2.63□□□□□ -1.99
RSP5P39940 YOR394C-AYOR394C-A 168 nt2.63□□□□□ -1.99
RSP5P39940 snR43snR43 209 nt2.63□□□□□ -1.99
RSP5P39940 SGM1YJR134C 2124 nt2.63□□□□□ -1.99
RSP5P39940 YIL082W-AYIL082W-A 4497 nt2.63□□□□□ -1.99
RSP5P39940 TOR1YJR066W 7413 nt2.62□□□□□ -1.99
RSP5P39940 YCR102W-AYCR102W-A 198 nt2.62□□□□□ -1.99
RSP5P39940 YDR344CYDR344C 444 nt2.62□□□□□ -1.99
RSP5P39940 ABF2YMR072W 552 nt2.62□□□□□ -1.99
RSP5P39940 YNL338WYNL338W 159 nt2.62□□□□□ -1.99
RSP5P39940 NOP53YPL146C 1368 nt2.61□□□□□ -1.99
RSP5P39940 RPH1YER169W 2391 nt2.61□□□□□ -1.99
RSP5P39940 ARP7YPR034W 1434 nt2.61□□□□□ -1.99
RSP5P39940 DBP6YNR038W 1890 nt2.61□□□□□ -1.99
RSP5P39940 RPL23BYER117W 414 nt2.61□□□□□ -1.99
RSP5P39940 ERP6YGL002W 651 nt2.61□□□□□ -1.99
RSP5P39940 UPS1YLR193C 528 nt2.61□□□□□ -1.99
RSP5P39940 RPO41YFL036W 4056 nt2.61□□□□□ -1.99
RSP5P39940 PXA2YKL188C 2562 nt2.61□□□□□ -1.99
RSP5P39940 BNR1YIL159W 4128 nt2.61□□□□□ -1.99
RSP5P39940 MUK1YPL070W 1839 nt2.61□□□□□ -1.99
RSP5P39940 SEC26YDR238C 2922 nt2.6□□□□□ -1.99
RSP5P39940 MCD1YDL003W 1701 nt2.6□□□□□ -1.99
RSP5P39940 RPS17AYML024W 411 nt2.6□□□□□ -1.99
RSP5P39940 ACM1YPL267W 630 nt2.6□□□□□ -1.99
RSP5P39940 RSE1YML049C 4086 nt2.6□□□□□ -1.99
RSP5P39940 ALG13YGL047W 609 nt2.59□□□□□ -1.99
RSP5P39940 YGL063C-AYGL063C-A 150 nt2.59□□□□□ -1.99
RSP5P39940 YHL042WYHL042W 453 nt2.59□□□□□ -1.99
RSP5P39940 YAL059C-AYAL059C-A 423 nt2.59□□□□□ -1.99
RSP5P39940 YOR011W-AYOR011W-A 207 nt2.59□□□□□ -1.99
RSP5P39940 ESC1YMR219W 4977 nt2.59□□□□□ -2
RSP5P39940 CLN3YAL040C 1743 nt2.59□□□□□ -2
RSP5P39940 UBR1YGR184C 5853 nt2.58□□□□□ -2
RSP5P39940 YDR239CYDR239C 2364 nt2.58□□□□□ -2
RSP5P39940 SLY1YDR189W 2001 nt2.58□□□□□ -2
RSP5P39940 TRL1YJL087C 2484 nt2.58□□□□□ -2
RSP5P39940 YDR426CYDR426C 378 nt2.58□□□□□ -2
RSP5P39940 YEL020C-BYEL020C-B 198 nt2.58□□□□□ -2
RSP5P39940 YIL020C-AYIL020C-A 339 nt2.58□□□□□ -2
RSP5P39940 SDH2YLL041C 801 nt2.58□□□□□ -2
RSP5P39940 TRX1YLR043C 312 nt2.58□□□□□ -2
RSP5P39940 IES4YOR189W 351 nt2.58□□□□□ -2
RSP5P39940 snR49snR49 165 nt2.58□□□□□ -2
RSP5P39940 TFC8YPL007C 1767 nt2.58□□□□□ -2
RSP5P39940 FLO11YIR019C 4104 nt2.57□□□□□ -2
RSP5P39940 SWI5YDR146C 2130 nt2.57□□□□□ -2
RSP5P39940 PTP3YER075C 2787 nt2.57□□□□□ -2
RSP5P39940 snR85snR85 171 nt2.57□□□□□ -2
RSP5P39940 YDL211CYDL211C 1119 nt2.57□□□□□ -2
RSP5P39940 tF(GAA)DtF(GAA)D 73 nt2.57□□□□□ -2
RSP5P39940 tF(GAA)NtF(GAA)N 73 nt2.57□□□□□ -2
RSP5P39940 YIL032CYIL032C 357 nt2.57□□□□□ -2
RSP5P39940 LCL1YPL056C 306 nt2.57□□□□□ -2
RSP5P39940 CFT2YLR115W 2580 nt2.57□□□□□ -2
RSP5P39940 PSD2YGR170W 3417 nt2.57□□□□□ -2
RSP5P39940 YDL062WYDL062W 426 nt2.56□□□□□ -2
RSP5P39940 EMP24YGL200C 612 nt2.56□□□□□ -2
RSP5P39940 YLR255CYLR255C 354 nt2.56□□□□□ -2
RSP5P39940 YPR002C-AYPR002C-A 198 nt2.56□□□□□ -2
RSP5P39940 SSQ1YLR369W 1974 nt2.56□□□□□ -2
RSP5P39940 YFH1YDL120W 525 nt2.55□□□□□ -2
RSP5P39940 YDR098C-BYDR098C-B 5268 nt2.55□□□□□ -2
RSP5P39940 YDR210C-DYDR210C-D 5268 nt2.55□□□□□ -2
RSP5P39940 YDR316W-BYDR316W-B 5268 nt2.55□□□□□ -2
RSP5P39940 YDR365W-BYDR365W-B 5268 nt2.55□□□□□ -2
RSP5P39940 YER138CYER138C 5268 nt2.55□□□□□ -2
RSP5P39940 YER160CYER160C 5268 nt2.55□□□□□ -2
RSP5P39940 BRP1YGL007W 378 nt2.55□□□□□ -2
RSP5P39940 YGR038C-BYGR038C-B 5268 nt2.55□□□□□ -2
RSP5P39940 YGR161C-DYGR161C-D 5268 nt2.55□□□□□ -2
RSP5P39940 YJR027WYJR027W 5268 nt2.55□□□□□ -2
RSP5P39940 YLR157C-BYLR157C-B 5268 nt2.55□□□□□ -2
RSP5P39940 YML039WYML039W 5268 nt2.55□□□□□ -2
RSP5P39940 YML045WYML045W 5268 nt2.55□□□□□ -2
RSP5P39940 YMR050CYMR050C 5268 nt2.55□□□□□ -2
RSP5P39940 YOL103W-BYOL103W-B 5268 nt2.55□□□□□ -2
RSP5P39940 YBR012W-BYBR012W-B 5271 nt2.55□□□□□ -2
RSP5P39940 YOR142W-BYOR142W-B 5268 nt2.55□□□□□ -2
RSP5P39940 CDC60YPL160W 3273 nt2.55□□□□□ -2
RSP5P39940 YPL257W-BYPL257W-B 5268 nt2.55□□□□□ -2
RSP5P39940 YPR063CYPR063C 423 nt2.55□□□□□ -2
RSP5P39940 YPR158W-BYPR158W-B 5271 nt2.55□□□□□ -2
RSP5P39940 YPL150WYPL150W 2706 nt2.55□□□□□ -2
RSP5P39940 RTT107YHR154W 3213 nt2.54□□□□□ -2
RSP5P39940 SDH6YDR379C-A 240 nt2.54□□□□□ -2
RSP5P39940 TIM9YEL020W-A 264 nt2.54□□□□□ -2
RSP5P39940 YLR012CYLR012C 300 nt2.54□□□□□ -2
RSP5P39940 CYB5YNL111C 363 nt2.54□□□□□ -2
RSP5P39940 YOL155W-AYOL155W-A 135 nt2.54□□□□□ -2
RSP5P39940 YOR008C-AYOR008C-A 225 nt2.54□□□□□ -2
RSP5P39940 TRA1YHR099W 11235 nt2.54□□□□□ -2
RSP5P39940 RFX1YLR176C 2436 nt2.54□□□□□ -2
RSP5P39940 HCS1YKL017C 2052 nt2.54□□□□□ -2
RSP5P39940 TRS65YGR166W 1683 nt2.53□□□□□ -2
RSP5P39940 INP2YMR163C 2118 nt2.53□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms