Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 CRAT-202ENST00000393384 973 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE6BP35913 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC25.07■■□□□ 1.6
PDE6BP35913 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC25.07■■□□□ 1.6
PDE6BP35913 AL137013.1-201ENST00000432946 1228 ntBASIC25.07■■□□□ 1.6
PDE6BP35913 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.07■■□□□ 1.6
PDE6BP35913 AC116562.2-201ENST00000507042 360 ntBASIC25.07■■□□□ 1.6
PDE6BP35913 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC25.07■■□□□ 1.6
PDE6BP35913 FITM1-202ENST00000559294 800 ntBASIC25.07■■□□□ 1.6
PDE6BP35913 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE6BP35913 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.07■■□□□ 1.6
PDE6BP35913 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PDE6BP35913 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.07■■□□□ 1.6
PDE6BP35913 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE6BP35913 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PDE6BP35913 TERF1P1-201ENST00000311003 1181 ntBASIC25.06■■□□□ 1.6
PDE6BP35913 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.06■■□□□ 1.6
PDE6BP35913 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
PDE6BP35913 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.06■■□□□ 1.6
PDE6BP35913 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.06■■□□□ 1.6
PDE6BP35913 CYP2D8P-201ENST00000433633 1490 ntBASIC25.06■■□□□ 1.6
PDE6BP35913 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PDE6BP35913 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
PDE6BP35913 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 AC010947.1-201ENST00000623454 693 ntBASIC25.05■■□□□ 1.6
PDE6BP35913 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC25.05■■□□□ 1.6
PDE6BP35913 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PDE6BP35913 C9orf163-202ENST00000624034 2573 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 KRT8P36-201ENST00000489121 1440 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 AC073508.3-201ENST00000619697 1419 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PDE6BP35913 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.04■■□□□ 1.6
PDE6BP35913 AL390955.1-201ENST00000428694 934 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 KSR1P1-201ENST00000446298 240 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
PDE6BP35913 CR392000.1-201ENST00000624770 1228 ntBASIC25.04■■□□□ 1.6
PDE6BP35913 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PDE6BP35913 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 AC242852.2-201ENST00000615738 1807 ntBASIC25.03■■□□□ 1.6
PDE6BP35913 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.03■■□□□ 1.6
PDE6BP35913 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PDE6BP35913 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC25.03■■□□□ 1.6
PDE6BP35913 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC25.03■■□□□ 1.6
PDE6BP35913 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.03■■□□□ 1.6
PDE6BP35913 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
PDE6BP35913 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
PDE6BP35913 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PDE6BP35913 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.02■■□□□ 1.6
PDE6BP35913 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
PDE6BP35913 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
PDE6BP35913 SLC25A3P1-201ENST00000443844 931 ntBASIC25.02■■□□□ 1.6
PDE6BP35913 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC25.02■■□□□ 1.6
PDE6BP35913 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC25.02■■□□□ 1.6
PDE6BP35913 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
PDE6BP35913 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PDE6BP35913 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC25.01■■□□□ 1.59
PDE6BP35913 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.01■■□□□ 1.59
PDE6BP35913 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC25.01■■□□□ 1.59
PDE6BP35913 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC25.01■■□□□ 1.59
PDE6BP35913 AC027702.1-201ENST00000563810 1770 ntBASIC25.01■■□□□ 1.59
PDE6BP35913 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 NIFKP9-201ENST00000419265 221 ntBASIC25.01■■□□□ 1.59
PDE6BP35913 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC25.01■■□□□ 1.59
PDE6BP35913 CFL2-205ENST00000555765 632 ntTSL 2 BASIC25.01■■□□□ 1.59
PDE6BP35913 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.01■■□□□ 1.59
PDE6BP35913 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.01■■□□□ 1.59
PDE6BP35913 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.01■■□□□ 1.59
PDE6BP35913 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PDE6BP35913 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms