Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.11■□□□□ 0.49
SOX6P35712 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.11■□□□□ 0.49
SOX6P35712 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.11■□□□□ 0.49
SOX6P35712 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.11■□□□□ 0.49
SOX6P35712 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SOX6P35712 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX6P35712 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.1■□□□□ 0.49
SOX6P35712 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 NEFHP1-201ENST00000412845 2629 ntBASIC18.1■□□□□ 0.49
SOX6P35712 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.1■□□□□ 0.49
SOX6P35712 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SOX6P35712 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
SOX6P35712 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SOX6P35712 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SOX6P35712 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
SOX6P35712 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 AP006587.3-201ENST00000525742 1516 ntBASIC18.09■□□□□ 0.49
SOX6P35712 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.09■□□□□ 0.49
SOX6P35712 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SOX6P35712 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SOX6P35712 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SOX6P35712 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.09■□□□□ 0.49
SOX6P35712 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
SOX6P35712 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SOX6P35712 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SOX6P35712 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SOX6P35712 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.08■□□□□ 0.49
SOX6P35712 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SOX6P35712 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SOX6P35712 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX6P35712 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX6P35712 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.08■□□□□ 0.48
SOX6P35712 AL356441.2-201ENST00000443009 864 ntBASIC18.08■□□□□ 0.48
SOX6P35712 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX6P35712 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 MIR6724-1-201ENST00000616420 92 ntBASIC18.08■□□□□ 0.48
SOX6P35712 MIR6724-2-201ENST00000616483 92 ntBASIC18.08■□□□□ 0.48
SOX6P35712 MIR6724-4-201ENST00000617390 92 ntBASIC18.08■□□□□ 0.48
SOX6P35712 MIR6724-3-201ENST00000622482 92 ntBASIC18.08■□□□□ 0.48
SOX6P35712 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.08■□□□□ 0.48
SOX6P35712 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
SOX6P35712 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX6P35712 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SOX6P35712 AC093503.3-201ENST00000624917 2352 ntBASIC18.08■□□□□ 0.48
SOX6P35712 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.08■□□□□ 0.48
SOX6P35712 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SOX6P35712 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.07■□□□□ 0.48
SOX6P35712 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SOX6P35712 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SOX6P35712 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SOX6P35712 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.07■□□□□ 0.48
SOX6P35712 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.07■□□□□ 0.48
SOX6P35712 AC005082.1-201ENST00000413042 2259 ntBASIC18.07■□□□□ 0.48
SOX6P35712 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SOX6P35712 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms