Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCK1P35558 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 PGM5P4-201ENST00000421970 445 ntBASIC21.24■□□□□ 0.99
PCK1P35558 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.24■□□□□ 0.99
PCK1P35558 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.24■□□□□ 0.99
PCK1P35558 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PCK1P35558 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.24■□□□□ 0.99
PCK1P35558 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.24■□□□□ 0.99
PCK1P35558 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCK1P35558 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PCK1P35558 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.23■□□□□ 0.99
PCK1P35558 AC087633.2-202ENST00000565166 1439 ntBASIC21.23■□□□□ 0.99
PCK1P35558 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 AL512408.1-201ENST00000569378 2000 ntBASIC21.23■□□□□ 0.99
PCK1P35558 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.23■□□□□ 0.99
PCK1P35558 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCK1P35558 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.23■□□□□ 0.99
PCK1P35558 RARRES2P4-201ENST00000514074 484 ntBASIC21.23■□□□□ 0.99
PCK1P35558 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.23■□□□□ 0.99
PCK1P35558 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.23■□□□□ 0.99
PCK1P35558 CYP21A1P-202ENST00000354927 1481 ntBASIC21.23■□□□□ 0.99
PCK1P35558 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PCK1P35558 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PCK1P35558 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCK1P35558 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PCK1P35558 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PCK1P35558 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.22■□□□□ 0.99
PCK1P35558 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PCK1P35558 AC100791.3-201ENST00000617619 330 ntBASIC21.22■□□□□ 0.99
PCK1P35558 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.22■□□□□ 0.99
PCK1P35558 AC231657.2-201ENST00000624556 255 ntBASIC21.22■□□□□ 0.99
PCK1P35558 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.22■□□□□ 0.99
PCK1P35558 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
PCK1P35558 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PCK1P35558 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.22■□□□□ 0.99
PCK1P35558 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PCK1P35558 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.22■□□□□ 0.99
PCK1P35558 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PCK1P35558 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.21■□□□□ 0.99
PCK1P35558 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PCK1P35558 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PCK1P35558 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PCK1P35558 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PCK1P35558 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
PCK1P35558 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms