Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN3P26045 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PTPN3P26045 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 AC093787.1-201ENST00000450396 207 ntBASIC20.65■□□□□ 0.9
PTPN3P26045 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN3P26045 CYP2T3P-201ENST00000601990 817 ntBASIC20.65■□□□□ 0.9
PTPN3P26045 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 AC112907.3-201ENST00000577781 2400 ntBASIC20.65■□□□□ 0.9
PTPN3P26045 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN3P26045 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN3P26045 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN3P26045 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN3P26045 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.64■□□□□ 0.9
PTPN3P26045 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN3P26045 AC010980.2-201ENST00000587099 1412 ntBASIC20.64■□□□□ 0.89
PTPN3P26045 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN3P26045 KRT18P68-201ENST00000392293 1000 ntBASIC20.64■□□□□ 0.89
PTPN3P26045 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.64■□□□□ 0.89
PTPN3P26045 AL355472.2-201ENST00000422958 438 ntBASIC20.64■□□□□ 0.89
PTPN3P26045 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.64■□□□□ 0.89
PTPN3P26045 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PTPN3P26045 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.64■□□□□ 0.89
PTPN3P26045 AL050303.2-201ENST00000619798 666 ntBASIC20.64■□□□□ 0.89
PTPN3P26045 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN3P26045 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PTPN3P26045 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PTPN3P26045 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN3P26045 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN3P26045 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 AC105020.6-201ENST00000621523 1217 ntBASIC20.63■□□□□ 0.89
PTPN3P26045 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN3P26045 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN3P26045 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PTPN3P26045 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN3P26045 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN3P26045 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN3P26045 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 AC026185.1-201ENST00000445748 174 ntBASIC20.62■□□□□ 0.89
PTPN3P26045 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN3P26045 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN3P26045 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN3P26045 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PTPN3P26045 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN3P26045 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PTPN3P26045 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN3P26045 AL512625.2-201ENST00000417533 625 ntBASIC20.61■□□□□ 0.89
PTPN3P26045 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 AC133552.2-202ENST00000575694 574 ntBASIC20.61■□□□□ 0.89
PTPN3P26045 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN3P26045 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN3P26045 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN3P26045 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms