Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.93□□□□□ -0.187e-7■■■■□ 24.1
RPS3P23396 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.11□□□□□ -0.317e-7■■■■□ 24.1
RPS3P23396 NDUFS2-205ENST00000468828 899 ntTSL 311.46□□□□□ -0.575e-7■■■■□ 24.1
RPS3P23396 DCAF13-208ENST00000612750 1967 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.767e-7■■■■□ 24.1
RPS3P23396 DCAF13-202ENST00000518554 5300 ntTSL 26.95□□□□□ -1.37e-7■■■■□ 24.1
RPS3P23396 NDUFS2-213ENST00000493849 910 ntTSL 35.01□□□□□ -1.615e-7■■■■□ 24.1
RPS3P23396 RPS10-203ENST00000464218 615 ntTSL 512.29□□□□□ -0.445e-10■■■■□ 24.1
RPS3P23396 RPS10-206ENST00000494077 781 ntTSL 211.48□□□□□ -0.575e-10■■■■□ 24.1
RPS3P23396 RPS10-204ENST00000467531 777 ntTSL 211.02□□□□□ -0.655e-10■■■■□ 24.1
RPS3P23396 RPS10-202ENST00000344700 650 ntTSL 3 BASIC9.6□□□□□ -0.875e-10■■■■□ 24.1
RPS3P23396 CDK1-208ENST00000519760 276 ntTSL 3-0.93□□□□□ -2.563e-8■■■■□ 24.1
RPS3P23396 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.575e-7■■■■□ 24.1
RPS3P23396 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.6■■□□□ 1.211e-8■■■■□ 24.1
RPS3P23396 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.09■■□□□ 1.132e-8■■■■□ 24.1
RPS3P23396 RNPEP-212ENST00000492587 780 ntTSL 521.29■■□□□ 12e-8■■■■□ 24.1
RPS3P23396 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.951e-8■■■■□ 24.1
RPS3P23396 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.89■□□□□ 0.932e-8■■■■□ 24.1
RPS3P23396 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.515e-7■■■■□ 24.1
RPS3P23396 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.08■□□□□ 0.492e-8■■■■□ 24.1
RPS3P23396 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.62■□□□□ 0.411e-6■■■■□ 24.1
RPS3P23396 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.192e-8■■■■□ 24.1
RPS3P23396 TMEM179B-204ENST00000532586 839 ntTSL 215.94■□□□□ 0.142e-8■■■■□ 24.1
RPS3P23396 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.121e-6■■■■□ 24.1
RPS3P23396 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.122e-8■■■■□ 24.1
RPS3P23396 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.58■□□□□ 0.081e-6■■■■□ 24.1
RPS3P23396 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.032e-8■■■■□ 24.1
RPS3P23396 RN7SKP230-201ENST00000365642 335 ntBASIC14.81□□□□□ -0.042e-8■■■■□ 24.1
RPS3P23396 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.41□□□□□ -0.16e-31■■■■□ 24.1
RPS3P23396 ALG3-209ENST00000462735 704 ntTSL 213.35□□□□□ -0.272e-8■■■■□ 24.1
RPS3P23396 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.381e-6■■■■□ 24.1
RPS3P23396 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.411e-6■■■■□ 24.1
RPS3P23396 RNPEP-206ENST00000471105 2093 ntTSL 1 (best)11.93□□□□□ -0.51e-8■■■■□ 24.1
RPS3P23396 GTF3C1-209ENST00000568569 540 ntTSL 511.12□□□□□ -0.635e-6■■■■□ 24.1
RPS3P23396 RNPEP-210ENST00000481780 847 ntTSL 510.19□□□□□ -0.782e-8■■■■□ 24.1
RPS3P23396 TMEM179B-203ENST00000532345 845 ntTSL 29.73□□□□□ -0.852e-8■■■■□ 24.1
RPS3P23396 RNPEP-211ENST00000487116 851 ntTSL 39.37□□□□□ -0.912e-8■■■■□ 24.1
RPS3P23396 ARSI-202ENST00000509146 472 ntTSL 49.11□□□□□ -0.952e-8■■■■□ 24.1
RPS3P23396 ALG3-210ENST00000463495 347 ntTSL 38.93□□□□□ -0.982e-8■■■■□ 24.1
RPS3P23396 NECTIN3-202ENST00000461477 586 ntTSL 48.62□□□□□ -1.035e-7■■■■□ 24.1
RPS3P23396 NECTIN3-210ENST00000491525 564 ntTSL 47.27□□□□□ -1.255e-7■■■■□ 24.1
RPS3P23396 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.311e-7■■■■□ 24.1
RPS3P23396 ASAH1-219ENST00000636033 1940 ntTSL 520.99■□□□□ 0.951e-8■■■■□ 24.1
RPS3P23396 ASAH1-216ENST00000635944 1960 ntTSL 517.98■□□□□ 0.471e-8■■■■□ 24.1
RPS3P23396 ASAH1-239ENST00000636920 1989 ntTSL 517.31■□□□□ 0.361e-8■■■■□ 24.1
RPS3P23396 ASAH1-217ENST00000635998 1845 ntTSL 517.05■□□□□ 0.321e-8■■■■□ 24.1
RPS3P23396 ASAH1-233ENST00000636701 2158 ntTSL 516.7■□□□□ 0.261e-8■■■■□ 24.1
RPS3P23396 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.64■□□□□ 0.251e-8■■■■□ 24.1
RPS3P23396 ASAH1-236ENST00000636815 1724 ntTSL 516.41■□□□□ 0.221e-8■■■■□ 24.1
RPS3P23396 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.11■□□□□ 0.171e-8■■■■□ 24.1
RPS3P23396 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.161e-8■■■■□ 24.1
RPS3P23396 ASAH1-243ENST00000637095 2048 ntTSL 515.88■□□□□ 0.131e-8■■■■□ 24.1
RPS3P23396 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.81■□□□□ 0.121e-8■■■■□ 24.1
RPS3P23396 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.071e-8■■■■□ 24.1
RPS3P23396 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.46■□□□□ 0.071e-8■■■■□ 24.1
RPS3P23396 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.34■□□□□ 0.051e-8■■■■□ 24.1
RPS3P23396 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.29■□□□□ 0.041e-8■■■■□ 24.1
RPS3P23396 ASAH1-222ENST00000636160 2328 ntTSL 515.14■□□□□ 0.011e-8■■■■□ 24.1
RPS3P23396 ASAH1-241ENST00000637013 2649 ntTSL 514.63□□□□□ -0.071e-8■■■■□ 24.1
RPS3P23396 ASAH1-228ENST00000636494 1975 ntTSL 514.61□□□□□ -0.071e-8■■■■□ 24.1
RPS3P23396 ASAH1-247ENST00000637429 2558 ntTSL 514.1□□□□□ -0.151e-8■■■■□ 24.1
RPS3P23396 ASAH1-245ENST00000637244 3151 ntTSL 1 (best)14.07□□□□□ -0.161e-8■■■■□ 24.1
RPS3P23396 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.211e-8■■■■□ 24.1
RPS3P23396 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC11.84□□□□□ -0.511e-8■■■■□ 24.1
RPS3P23396 ASAH1-269ENST00000638069 3068 ntTSL 511.34□□□□□ -0.591e-8■■■■□ 24.1
RPS3P23396 ASAH1-248ENST00000637484 2304 ntTSL 58.56□□□□□ -1.041e-8■■■■□ 24.1
RPS3P23396 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC8.18□□□□□ -1.11e-8■■■■□ 24.1
RPS3P23396 ASAH1-220ENST00000636050 2546 ntTSL 57.68□□□□□ -1.181e-8■■■■□ 24.1
RPS3P23396 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.19□□□□□ -1.261e-8■■■■□ 24.1
RPS3P23396 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.18□□□□□ -1.261e-8■■■■□ 24.1
RPS3P23396 ASAH1-253ENST00000637609 4981 ntTSL 56.91□□□□□ -1.31e-8■■■■□ 24.1
RPS3P23396 ALDOA-210ENST00000563987 586 ntTSL 210.39□□□□□ -0.751e-60■■■■□ 24.1
RPS3P23396 EIF4A1-231ENST00000584054 716 ntTSL 29.88□□□□□ -0.831e-12■■■■□ 24.1
RPS3P23396 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.041e-6■■■■□ 24.1
RPS3P23396 P4HA2-221ENST00000506807 463 ntTSL 33.23□□□□□ -1.896e-13■■■■□ 24.1
RPS3P23396 TMEM59L-204ENST00000598660 1683 ntTSL 521.59■■□□□ 1.058e-7■■■■□ 24.1
RPS3P23396 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.478e-7■■■■□ 24.1
RPS3P23396 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.378e-7■■■■□ 24.1
RPS3P23396 RAN-205ENST00000477395 762 ntTSL 516.72■□□□□ 0.271e-8■■■■□ 24.1
RPS3P23396 RAN-207ENST00000536606 572 ntTSL 39.17□□□□□ -0.941e-8■■■■□ 24.1
RPS3P23396 TRIM27-203ENST00000414543 1813 ntTSL 310.19□□□□□ -0.782e-6■■■■□ 24.1
RPS3P23396 ATIC-207ENST00000443953 2187 ntTSL 220.13■□□□□ 0.812e-7■■■■□ 24.1
RPS3P23396 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.9■□□□□ 0.622e-7■■■■□ 24.1
RPS3P23396 ATIC-204ENST00000427397 1046 ntTSL 518.22■□□□□ 0.512e-7■■■■□ 24.1
RPS3P23396 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.492e-7■■■■□ 24.1
RPS3P23396 GSN-211ENST00000477553 680 ntTSL 212.38□□□□□ -0.437e-17■■■■□ 24.1
RPS3P23396 LPCAT2-207ENST00000566911 832 ntTSL 219.7■□□□□ 0.747e-6■■■■□ 24.1
RPS3P23396 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.91■□□□□ 0.467e-6■■■■□ 24.1
RPS3P23396 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.17e-6■■■■□ 24.1
RPS3P23396 GATB-202ENST00000503160 1860 ntTSL 513.19□□□□□ -0.37e-6■■■■□ 24.1
RPS3P23396 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.397e-6■■■■□ 24.1
RPS3P23396 GATB-203ENST00000505211 697 ntTSL 510.7□□□□□ -0.77e-6■■■■□ 24.1
RPS3P23396 GATB-214ENST00000515884 779 ntTSL 59.56□□□□□ -0.887e-6■■■■□ 24.1
RPS3P23396 GATB-212ENST00000515564 6552 ntTSL 27.86□□□□□ -1.157e-6■■■■□ 24.1
RPS3P23396 STT3A-203ENST00000525431 552 ntTSL 48.85□□□□□ -0.991e-7■■■■□ 24
RPS3P23396 COX4I1-212ENST00000566617 572 ntTSL 427.73■■■□□ 2.034e-9■■■■□ 24
RPS3P23396 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.79□□□□□ -1.967e-7■■■■□ 24
RPS3P23396 PLOD3-213ENST00000478264 663 ntTSL 217.93■□□□□ 0.462e-9■■■■□ 24
RPS3P23396 ETFA-219ENST00000561092 461 ntTSL 318.77■□□□□ 0.69e-9■■■■□ 24
RPS3P23396 ATIC-208ENST00000444305 569 ntTSL 415.05■□□□□ -03e-7■■■■□ 24
RPS3P23396 ATIC-214ENST00000488712 744 ntTSL 39.71□□□□□ -0.863e-7■■■■□ 24
Retrieved 100 of 24,271 protein–RNA pairs in 289.6 ms