RNA–Protein interactions for RNA: ENST00000491525.5

NECTIN3-210, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-210ENST00000491525 AEBP2Q6ZN18 517 aaPredicted RBP27.59■■■□□ 2.01
NECTIN3-210ENST00000491525 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
NECTIN3-210ENST00000491525 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
NECTIN3-210ENST00000491525 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
NECTIN3-210ENST00000491525 FOXD1Q16676 465 aa21.9■■□□□ 1.1
NECTIN3-210ENST00000491525 PLPPR3Q6T4P5 718 aa21.46■■□□□ 1.03
NECTIN3-210ENST00000491525 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
NECTIN3-210ENST00000491525 ADRA2BP18089 450 aa20.67■□□□□ 0.9
NECTIN3-210ENST00000491525 PIAS4Q8N2W9 510 aaPredicted RBP20.6■□□□□ 0.89
NECTIN3-210ENST00000491525 MSH5O43196 834 aa20.47■□□□□ 0.87
NECTIN3-210ENST00000491525 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
NECTIN3-210ENST00000491525 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.65
NECTIN3-210ENST00000491525 MAPK8IP2Q13387 824 aaPredicted RBP18.88■□□□□ 0.61
NECTIN3-210ENST00000491525 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
NECTIN3-210ENST00000491525 DMRT2Q9Y5R5 561 aa18.74■□□□□ 0.59
NECTIN3-210ENST00000491525 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
NECTIN3-210ENST00000491525 CNKSR2Q8WXI2 1034 aa18.42■□□□□ 0.54
NECTIN3-210ENST00000491525 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
NECTIN3-210ENST00000491525 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
NECTIN3-210ENST00000491525 RNF216Q9NWF9 866 aaPredicted RBP18.15■□□□□ 0.5
NECTIN3-210ENST00000491525 DCAF8L1A6NGE4 600 aa18.05■□□□□ 0.48
NECTIN3-210ENST00000491525 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
NECTIN3-210ENST00000491525 KCNA4P22459 653 aa17.82■□□□□ 0.44
NECTIN3-210ENST00000491525 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
NECTIN3-210ENST00000491525 RNF39Q9H2S5 420 aa17.43■□□□□ 0.38
NECTIN3-210ENST00000491525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.4■□□□□ 0.38
NECTIN3-210ENST00000491525 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
NECTIN3-210ENST00000491525 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
NECTIN3-210ENST00000491525 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
NECTIN3-210ENST00000491525 U3KPZ7 1027 aaPredicted RBP16.97■□□□□ 0.31
NECTIN3-210ENST00000491525 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
NECTIN3-210ENST00000491525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
NECTIN3-210ENST00000491525 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
NECTIN3-210ENST00000491525 APLP2Q06481 763 aa16.71■□□□□ 0.27
NECTIN3-210ENST00000491525 CAPN15O75808 1086 aa16.68■□□□□ 0.26
NECTIN3-210ENST00000491525 SAMD1Q6SPF0 538 aaPredicted RBP16.64■□□□□ 0.25
NECTIN3-210ENST00000491525 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
NECTIN3-210ENST00000491525 MYCNP04198 464 aaPredicted RBP16.6■□□□□ 0.25
NECTIN3-210ENST00000491525 FOXD4L1Q9NU39 408 aa16.59■□□□□ 0.25
NECTIN3-210ENST00000491525 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
NECTIN3-210ENST00000491525 ZNF219Q9P2Y4 722 aaPredicted RBP16.48■□□□□ 0.23
NECTIN3-210ENST00000491525 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
NECTIN3-210ENST00000491525 DSG3P32926 999 aa16.43■□□□□ 0.22
NECTIN3-210ENST00000491525 ZBTB22O15209 634 aa16.32■□□□□ 0.2
NECTIN3-210ENST00000491525 ABCB7O75027 752 aa16.27■□□□□ 0.2
NECTIN3-210ENST00000491525 ABCC9O60706 1549 aa16.15■□□□□ 0.18
NECTIN3-210ENST00000491525 POLA2Q14181 598 aa16.09■□□□□ 0.17
NECTIN3-210ENST00000491525 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.16
NECTIN3-210ENST00000491525 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
NECTIN3-210ENST00000491525 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
NECTIN3-210ENST00000491525 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
NECTIN3-210ENST00000491525 ZBTB12Q9Y330 459 aaPredicted RBP15.86■□□□□ 0.13
NECTIN3-210ENST00000491525 RBM42Q9BTD8 480 aaKnown RBP15.78■□□□□ 0.12
NECTIN3-210ENST00000491525 FBLN2P98095 1184 aa15.6■□□□□ 0.09
NECTIN3-210ENST00000491525 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
NECTIN3-210ENST00000491525 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
NECTIN3-210ENST00000491525 NACADO15069 1562 aa15.49■□□□□ 0.07
NECTIN3-210ENST00000491525 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
NECTIN3-210ENST00000491525 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
NECTIN3-210ENST00000491525 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
NECTIN3-210ENST00000491525 MKRN4PQ13434 485 aaPredicted RBP15.36■□□□□ 0.05
NECTIN3-210ENST00000491525 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
NECTIN3-210ENST00000491525 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
NECTIN3-210ENST00000491525 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
NECTIN3-210ENST00000491525 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
NECTIN3-210ENST00000491525 DCAF1Q9Y4B6 1507 aa15.3■□□□□ 0.04
NECTIN3-210ENST00000491525 POTEHQ6S545 545 aa15.27■□□□□ 0.04
NECTIN3-210ENST00000491525 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
NECTIN3-210ENST00000491525 CHRDL2Q6WN34 429 aa15.24■□□□□ 0.03
NECTIN3-210ENST00000491525 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
NECTIN3-210ENST00000491525 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
NECTIN3-210ENST00000491525 SSUH2Q9Y2M2 353 aa15.12■□□□□ 0.01
NECTIN3-210ENST00000491525 BICRAQ9NZM4 1560 aa15.08■□□□□ 0
NECTIN3-210ENST00000491525 PITPNM1O00562 1244 aa15.07■□□□□ 0
NECTIN3-210ENST00000491525 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
NECTIN3-210ENST00000491525 SPDYE1Q8NFV5 336 aaPredicted RBP15.03■□□□□ -0
NECTIN3-210ENST00000491525 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
NECTIN3-210ENST00000491525 CLEC11AQ9Y240 323 aa14.99□□□□□ -0.01
NECTIN3-210ENST00000491525 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
NECTIN3-210ENST00000491525 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
NECTIN3-210ENST00000491525 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
NECTIN3-210ENST00000491525 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
NECTIN3-210ENST00000491525 PRR29P0C7W0 189 aa14.8□□□□□ -0.04
NECTIN3-210ENST00000491525 PRKAR2AP13861 404 aaKnown RBP14.73□□□□□ -0.05
NECTIN3-210ENST00000491525 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
NECTIN3-210ENST00000491525 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
NECTIN3-210ENST00000491525 HAX1O00165 279 aa14.64□□□□□ -0.07
NECTIN3-210ENST00000491525 CC2D2AQ9P2K1 1620 aa14.62□□□□□ -0.07
NECTIN3-210ENST00000491525 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
NECTIN3-210ENST00000491525 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
NECTIN3-210ENST00000491525 PROM2Q8N271 834 aa14.5□□□□□ -0.09
NECTIN3-210ENST00000491525 FKBP8Q14318 412 aa14.48□□□□□ -0.09
NECTIN3-210ENST00000491525 SP7Q8TDD2 431 aaPredicted RBP14.47□□□□□ -0.09
NECTIN3-210ENST00000491525 FARP1Q9Y4F1 1045 aaPredicted RBP14.44□□□□□ -0.1
NECTIN3-210ENST00000491525 CREBZFQ9NS37 354 aa14.4□□□□□ -0.1
NECTIN3-210ENST00000491525 C19orf67A6NJJ6 358 aa14.38□□□□□ -0.11
NECTIN3-210ENST00000491525 SMARCA4P51532 1647 aa14.34□□□□□ -0.11
NECTIN3-210ENST00000491525 EVX2Q03828 476 aa14.34□□□□□ -0.11
NECTIN3-210ENST00000491525 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
NECTIN3-210ENST00000491525 NCAPD3P42695 1498 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms