Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HLA-DPA1P20036 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 MKRN4P-201ENST00000444706 1521 ntBASIC20.4■□□□□ 0.86
HLA-DPA1P20036 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 AL121832.2-201ENST00000610979 668 ntBASIC20.4■□□□□ 0.86
HLA-DPA1P20036 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 AL162377.1-201ENST00000618844 1793 ntBASIC20.4■□□□□ 0.86
HLA-DPA1P20036 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HLA-DPA1P20036 AL512408.1-201ENST00000569378 2000 ntBASIC20.39■□□□□ 0.86
HLA-DPA1P20036 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DPA1P20036 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DPA1P20036 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DPA1P20036 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.39■□□□□ 0.86
HLA-DPA1P20036 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HLA-DPA1P20036 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.39■□□□□ 0.85
HLA-DPA1P20036 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.39■□□□□ 0.85
HLA-DPA1P20036 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 DPP3P2-201ENST00000416030 1696 ntBASIC20.38■□□□□ 0.85
HLA-DPA1P20036 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
HLA-DPA1P20036 KRT17P1-201ENST00000399211 1546 ntBASIC20.37■□□□□ 0.85
HLA-DPA1P20036 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
HLA-DPA1P20036 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms