Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A1P12107 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
COL11A1P12107 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A1P12107 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A1P12107 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A1P12107 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.18■■□□□ 1.3
COL11A1P12107 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A1P12107 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC23.17■■□□□ 1.3
COL11A1P12107 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.17■■□□□ 1.3
COL11A1P12107 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.17■■□□□ 1.3
COL11A1P12107 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL11A1P12107 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
COL11A1P12107 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL11A1P12107 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.17■■□□□ 1.3
COL11A1P12107 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
COL11A1P12107 AF106564.1-201ENST00000607058 2553 ntBASIC23.17■■□□□ 1.3
COL11A1P12107 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.17■■□□□ 1.3
COL11A1P12107 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL11A1P12107 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A1P12107 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.16■■□□□ 1.3
COL11A1P12107 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.16■■□□□ 1.3
COL11A1P12107 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC23.16■■□□□ 1.3
COL11A1P12107 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC23.16■■□□□ 1.3
COL11A1P12107 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL11A1P12107 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL11A1P12107 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
COL11A1P12107 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC23.15■■□□□ 1.3
COL11A1P12107 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL11A1P12107 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
COL11A1P12107 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL11A1P12107 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.15■■□□□ 1.3
COL11A1P12107 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL11A1P12107 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL11A1P12107 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A1P12107 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL11A1P12107 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC23.14■■□□□ 1.3
COL11A1P12107 AL135905.2-201ENST00000584934 1404 ntBASIC23.14■■□□□ 1.3
COL11A1P12107 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.14■■□□□ 1.29
COL11A1P12107 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
COL11A1P12107 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC23.14■■□□□ 1.29
COL11A1P12107 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC23.14■■□□□ 1.29
COL11A1P12107 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 KRT16P5-201ENST00000455284 522 ntBASIC23.14■■□□□ 1.29
COL11A1P12107 AL121603.2-201ENST00000557373 2117 ntBASIC23.14■■□□□ 1.29
COL11A1P12107 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.14■■□□□ 1.29
COL11A1P12107 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC23.14■■□□□ 1.29
COL11A1P12107 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
COL11A1P12107 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL11A1P12107 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.13■■□□□ 1.29
COL11A1P12107 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.13■■□□□ 1.29
COL11A1P12107 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A1P12107 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A1P12107 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC23.13■■□□□ 1.29
COL11A1P12107 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
COL11A1P12107 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A1P12107 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.13■■□□□ 1.29
COL11A1P12107 MIR4785-201ENST00000585005 73 ntBASIC23.13■■□□□ 1.29
COL11A1P12107 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.13■■□□□ 1.29
COL11A1P12107 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A1P12107 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A1P12107 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A1P12107 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL11A1P12107 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.12■■□□□ 1.29
COL11A1P12107 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL11A1P12107 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.12■■□□□ 1.29
COL11A1P12107 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms