Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 AC073648.6-201ENST00000641589 218 ntBASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCNYL3P0C7X3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 AC092368.3-202ENST00000574180 1591 ntBASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 KRT17P3-201ENST00000420566 1262 ntBASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNYL3P0C7X3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 PNMA6B-201ENST00000538162 1200 ntBASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCNYL3P0C7X3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 UNC93B4-201ENST00000505679 747 ntBASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNYL3P0C7X3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNYL3P0C7X3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms