Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.06■□□□□ 0.96
RHOP08100 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.06■□□□□ 0.96
RHOP08100 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.06■□□□□ 0.96
RHOP08100 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.06■□□□□ 0.96
RHOP08100 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.06■□□□□ 0.96
RHOP08100 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RHOP08100 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RHOP08100 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.05■□□□□ 0.96
RHOP08100 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RHOP08100 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RHOP08100 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.05■□□□□ 0.96
RHOP08100 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.05■□□□□ 0.96
RHOP08100 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RHOP08100 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.05■□□□□ 0.96
RHOP08100 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.05■□□□□ 0.96
RHOP08100 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.05■□□□□ 0.96
RHOP08100 AL355075.4-201ENST00000554988 638 ntBASIC21.05■□□□□ 0.96
RHOP08100 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RHOP08100 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.04■□□□□ 0.96
RHOP08100 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RHOP08100 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.04■□□□□ 0.96
RHOP08100 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.04■□□□□ 0.96
RHOP08100 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.04■□□□□ 0.96
RHOP08100 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 AL024507.2-201ENST00000606070 2574 ntBASIC21.04■□□□□ 0.96
RHOP08100 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RHOP08100 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.04■□□□□ 0.96
RHOP08100 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
RHOP08100 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.04■□□□□ 0.96
RHOP08100 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.03■□□□□ 0.96
RHOP08100 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.03■□□□□ 0.96
RHOP08100 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.03■□□□□ 0.96
RHOP08100 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 NBPF21P-201ENST00000425093 1451 ntBASIC21.03■□□□□ 0.96
RHOP08100 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 AC087499.1-201ENST00000418141 1075 ntBASIC21.03■□□□□ 0.96
RHOP08100 KRT16P5-201ENST00000455284 522 ntBASIC21.03■□□□□ 0.96
RHOP08100 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.03■□□□□ 0.96
RHOP08100 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.03■□□□□ 0.96
RHOP08100 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.03■□□□□ 0.96
RHOP08100 AC133561.5-201ENST00000635547 218 ntBASIC21.03■□□□□ 0.96
RHOP08100 AC121338.2-201ENST00000622535 1744 ntBASIC21.03■□□□□ 0.96
RHOP08100 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
RHOP08100 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RHOP08100 HTR7P1-201ENST00000538670 1336 ntBASIC21.03■□□□□ 0.96
RHOP08100 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.02■□□□□ 0.96
RHOP08100 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.02■□□□□ 0.96
RHOP08100 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
RHOP08100 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.02■□□□□ 0.96
RHOP08100 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.02■□□□□ 0.96
RHOP08100 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.02■□□□□ 0.96
RHOP08100 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.02■□□□□ 0.96
RHOP08100 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.02■□□□□ 0.96
RHOP08100 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.02■□□□□ 0.96
RHOP08100 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 AL049796.1-201ENST00000565336 1766 ntBASIC21.02■□□□□ 0.96
RHOP08100 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RHOP08100 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RHOP08100 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.02■□□□□ 0.95
RHOP08100 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.02■□□□□ 0.95
RHOP08100 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RHOP08100 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RHOP08100 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms