Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
UBL3O95164 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 CDV3P1-201ENST00000471403 739 ntBASIC18.1■□□□□ 0.49
UBL3O95164 DUX4L16-201ENST00000555130 1264 ntBASIC18.1■□□□□ 0.49
UBL3O95164 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.1■□□□□ 0.49
UBL3O95164 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.1■□□□□ 0.49
UBL3O95164 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 AC080038.1-201ENST00000611274 1154 ntBASIC18.1■□□□□ 0.49
UBL3O95164 AC087289.5-201ENST00000586076 3175 ntBASIC18.1■□□□□ 0.49
UBL3O95164 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.1■□□□□ 0.49
UBL3O95164 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 AC020907.5-201ENST00000624372 1936 ntBASIC18.1■□□□□ 0.49
UBL3O95164 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.09■□□□□ 0.49
UBL3O95164 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.09■□□□□ 0.49
UBL3O95164 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 AL020996.1-203ENST00000536896 2307 ntBASIC18.09■□□□□ 0.49
UBL3O95164 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UBL3O95164 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UBL3O95164 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
UBL3O95164 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBL3O95164 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.09■□□□□ 0.49
UBL3O95164 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.09■□□□□ 0.49
UBL3O95164 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
UBL3O95164 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBL3O95164 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.08■□□□□ 0.49
UBL3O95164 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.08■□□□□ 0.48
UBL3O95164 AC091799.1-201ENST00000422823 811 ntBASIC18.08■□□□□ 0.48
UBL3O95164 AC007322.1-201ENST00000426983 750 ntBASIC18.08■□□□□ 0.48
UBL3O95164 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.08■□□□□ 0.48
UBL3O95164 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.08■□□□□ 0.48
UBL3O95164 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.08■□□□□ 0.48
UBL3O95164 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL3O95164 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBL3O95164 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.08■□□□□ 0.48
UBL3O95164 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.08■□□□□ 0.48
UBL3O95164 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.08■□□□□ 0.48
UBL3O95164 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBL3O95164 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.07■□□□□ 0.48
UBL3O95164 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBL3O95164 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 AC116050.2-201ENST00000612102 1779 ntBASIC18.07■□□□□ 0.48
UBL3O95164 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
UBL3O95164 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.07■□□□□ 0.48
UBL3O95164 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.07■□□□□ 0.48
UBL3O95164 AL591742.1-201ENST00000604433 565 ntBASIC18.07■□□□□ 0.48
UBL3O95164 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UBL3O95164 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.07■□□□□ 0.48
UBL3O95164 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UBL3O95164 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBL3O95164 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.07■□□□□ 0.48
UBL3O95164 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.06■□□□□ 0.48
UBL3O95164 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.06■□□□□ 0.48
UBL3O95164 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.06■□□□□ 0.48
UBL3O95164 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBL3O95164 SMG8-203ENST00000578922 2178 ntBASIC18.06■□□□□ 0.48
UBL3O95164 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms