Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 TSPY26P-201ENST00000476365 1326 ntBASIC16.49■□□□□ 0.23
SCAF4O95104 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SCAF4O95104 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.49■□□□□ 0.23
SCAF4O95104 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.49■□□□□ 0.23
SCAF4O95104 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.49■□□□□ 0.23
SCAF4O95104 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SCAF4O95104 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SCAF4O95104 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SCAF4O95104 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SCAF4O95104 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.48■□□□□ 0.23
SCAF4O95104 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 AC009237.3-201ENST00000393279 1427 ntBASIC16.48■□□□□ 0.23
SCAF4O95104 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAF4O95104 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.48■□□□□ 0.23
SCAF4O95104 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.48■□□□□ 0.23
SCAF4O95104 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
SCAF4O95104 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.48■□□□□ 0.23
SCAF4O95104 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCAF4O95104 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SCAF4O95104 AC011484.1-201ENST00000377652 1995 ntBASIC16.47■□□□□ 0.23
SCAF4O95104 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 AC116562.4-201ENST00000641316 2276 ntBASIC16.47■□□□□ 0.23
SCAF4O95104 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAF4O95104 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
SCAF4O95104 IGHV3-19-201ENST00000521488 291 ntBASIC16.47■□□□□ 0.23
SCAF4O95104 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAF4O95104 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAF4O95104 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
SCAF4O95104 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAF4O95104 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAF4O95104 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
SCAF4O95104 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SCAF4O95104 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SCAF4O95104 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.46■□□□□ 0.23
SCAF4O95104 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.46■□□□□ 0.23
SCAF4O95104 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAF4O95104 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.46■□□□□ 0.23
SCAF4O95104 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAF4O95104 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAF4O95104 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.46■□□□□ 0.23
SCAF4O95104 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.46■□□□□ 0.23
SCAF4O95104 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAF4O95104 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAF4O95104 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAF4O95104 FP700111.2-201ENST00000619190 1892 ntBASIC16.46■□□□□ 0.22
SCAF4O95104 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SCAF4O95104 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAF4O95104 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.46■□□□□ 0.22
SCAF4O95104 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAF4O95104 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms