Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.43■□□□□ 0.86
USP1O94782 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
USP1O94782 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.43■□□□□ 0.86
USP1O94782 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.43■□□□□ 0.86
USP1O94782 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USP1O94782 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
USP1O94782 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP1O94782 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 SMG8-203ENST00000578922 2178 ntBASIC20.42■□□□□ 0.86
USP1O94782 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP1O94782 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
USP1O94782 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.42■□□□□ 0.86
USP1O94782 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.42■□□□□ 0.86
USP1O94782 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP1O94782 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP1O94782 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP1O94782 AFG3L1P-217ENST00000557444 2447 ntBASIC20.42■□□□□ 0.86
USP1O94782 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
USP1O94782 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
USP1O94782 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.41■□□□□ 0.86
USP1O94782 TERF1P5-201ENST00000477545 1207 ntBASIC20.41■□□□□ 0.86
USP1O94782 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.41■□□□□ 0.86
USP1O94782 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.41■□□□□ 0.86
USP1O94782 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP1O94782 TCF3P1-201ENST00000423021 1937 ntBASIC20.41■□□□□ 0.86
USP1O94782 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USP1O94782 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.4■□□□□ 0.86
USP1O94782 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.4■□□□□ 0.86
USP1O94782 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
USP1O94782 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
USP1O94782 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.4■□□□□ 0.86
USP1O94782 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
USP1O94782 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.4■□□□□ 0.86
USP1O94782 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.4■□□□□ 0.86
USP1O94782 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 AC010536.3-201ENST00000620306 533 ntBASIC20.4■□□□□ 0.86
USP1O94782 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.4■□□□□ 0.86
USP1O94782 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP1O94782 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
USP1O94782 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP1O94782 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP1O94782 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.39■□□□□ 0.86
USP1O94782 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP1O94782 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.39■□□□□ 0.85
USP1O94782 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.39■□□□□ 0.85
USP1O94782 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.39■□□□□ 0.85
USP1O94782 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.39■□□□□ 0.85
USP1O94782 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
USP1O94782 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP1O94782 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP1O94782 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.38■□□□□ 0.85
USP1O94782 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP1O94782 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.38■□□□□ 0.85
USP1O94782 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.38■□□□□ 0.85
USP1O94782 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP1O94782 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.38■□□□□ 0.85
USP1O94782 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP1O94782 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP1O94782 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms