Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 KRT18P68-201ENST00000392293 1000 ntBASIC20.54■□□□□ 0.88
PMPCBO75439 AC133552.2-202ENST00000575694 574 ntBASIC20.54■□□□□ 0.88
PMPCBO75439 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PMPCBO75439 CYP2T3P-201ENST00000601990 817 ntBASIC20.54■□□□□ 0.88
PMPCBO75439 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.54■□□□□ 0.88
PMPCBO75439 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PMPCBO75439 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PMPCBO75439 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PMPCBO75439 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.53■□□□□ 0.88
PMPCBO75439 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.53■□□□□ 0.88
PMPCBO75439 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.53■□□□□ 0.88
PMPCBO75439 AC006970.2-201ENST00000450065 779 ntBASIC20.53■□□□□ 0.88
PMPCBO75439 AC105036.2-201ENST00000569468 176 ntBASIC20.53■□□□□ 0.88
PMPCBO75439 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.53■□□□□ 0.88
PMPCBO75439 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.53■□□□□ 0.88
PMPCBO75439 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PMPCBO75439 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PMPCBO75439 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PMPCBO75439 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PMPCBO75439 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.53■□□□□ 0.88
PMPCBO75439 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.52■□□□□ 0.88
PMPCBO75439 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.52■□□□□ 0.88
PMPCBO75439 AL512625.2-201ENST00000417533 625 ntBASIC20.52■□□□□ 0.88
PMPCBO75439 AF201337.1-201ENST00000520239 748 ntBASIC20.52■□□□□ 0.88
PMPCBO75439 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PMPCBO75439 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.52■□□□□ 0.88
PMPCBO75439 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PMPCBO75439 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PMPCBO75439 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PMPCBO75439 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
PMPCBO75439 DPP3P2-201ENST00000416030 1696 ntBASIC20.51■□□□□ 0.87
PMPCBO75439 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.51■□□□□ 0.87
PMPCBO75439 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PMPCBO75439 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.51■□□□□ 0.87
PMPCBO75439 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.51■□□□□ 0.87
PMPCBO75439 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.51■□□□□ 0.87
PMPCBO75439 PCDHAC2-203ENST00000615316 3011 ntBASIC20.51■□□□□ 0.87
PMPCBO75439 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
PMPCBO75439 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
PMPCBO75439 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PMPCBO75439 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.51■□□□□ 0.87
PMPCBO75439 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PMPCBO75439 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.5■□□□□ 0.87
PMPCBO75439 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PMPCBO75439 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.5■□□□□ 0.87
PMPCBO75439 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.5■□□□□ 0.87
PMPCBO75439 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.5■□□□□ 0.87
PMPCBO75439 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.5■□□□□ 0.87
PMPCBO75439 AC105020.6-201ENST00000621523 1217 ntBASIC20.5■□□□□ 0.87
PMPCBO75439 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PMPCBO75439 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.5■□□□□ 0.87
PMPCBO75439 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms