Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PEX1O43933 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.63■□□□□ 0.73
PEX1O43933 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.63■□□□□ 0.73
PEX1O43933 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.63■□□□□ 0.73
PEX1O43933 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.63■□□□□ 0.73
PEX1O43933 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PEX1O43933 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PEX1O43933 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PEX1O43933 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX1O43933 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PEX1O43933 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX1O43933 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX1O43933 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX1O43933 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX1O43933 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX1O43933 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.62■□□□□ 0.73
PEX1O43933 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.62■□□□□ 0.73
PEX1O43933 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PEX1O43933 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PEX1O43933 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.61■□□□□ 0.73
PEX1O43933 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.61■□□□□ 0.73
PEX1O43933 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.61■□□□□ 0.73
PEX1O43933 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
PEX1O43933 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX1O43933 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
PEX1O43933 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX1O43933 AC080038.1-201ENST00000611274 1154 ntBASIC19.6■□□□□ 0.73
PEX1O43933 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PEX1O43933 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.6■□□□□ 0.73
PEX1O43933 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PEX1O43933 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PEX1O43933 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PEX1O43933 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
PEX1O43933 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PEX1O43933 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PEX1O43933 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PEX1O43933 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.59■□□□□ 0.73
PEX1O43933 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PEX1O43933 AP000974.1-201ENST00000623909 2387 ntBASIC19.59■□□□□ 0.73
PEX1O43933 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PEX1O43933 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.59■□□□□ 0.73
PEX1O43933 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PEX1O43933 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PEX1O43933 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms