Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC092720.2-201ENST00000602388 1665 ntBASIC17.24■□□□□ 0.35
SSNA1O43805 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.24■□□□□ 0.35
SSNA1O43805 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.24■□□□□ 0.35
SSNA1O43805 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.24■□□□□ 0.35
SSNA1O43805 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SSNA1O43805 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SSNA1O43805 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SSNA1O43805 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.24■□□□□ 0.35
SSNA1O43805 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.23■□□□□ 0.35
SSNA1O43805 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.23■□□□□ 0.35
SSNA1O43805 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.23■□□□□ 0.35
SSNA1O43805 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.23■□□□□ 0.35
SSNA1O43805 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SSNA1O43805 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.23■□□□□ 0.35
SSNA1O43805 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SSNA1O43805 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SSNA1O43805 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SSNA1O43805 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.22■□□□□ 0.35
SSNA1O43805 MIR6722-201ENST00000617286 78 ntBASIC17.22■□□□□ 0.35
SSNA1O43805 AC129492.7-201ENST00000622992 756 ntBASIC17.22■□□□□ 0.35
SSNA1O43805 FZD10-202ENST00000539839 3282 ntBASIC17.22■□□□□ 0.35
SSNA1O43805 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 AC093484.2-201ENST00000580996 2166 ntBASIC17.22■□□□□ 0.35
SSNA1O43805 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SSNA1O43805 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.22■□□□□ 0.35
SSNA1O43805 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.21■□□□□ 0.35
SSNA1O43805 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SSNA1O43805 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SSNA1O43805 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SSNA1O43805 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 AC087239.1-201ENST00000622671 572 ntBASIC17.21■□□□□ 0.35
SSNA1O43805 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SSNA1O43805 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SSNA1O43805 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.21■□□□□ 0.35
SSNA1O43805 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
SSNA1O43805 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.21■□□□□ 0.35
SSNA1O43805 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.21■□□□□ 0.35
SSNA1O43805 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SSNA1O43805 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
SSNA1O43805 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SSNA1O43805 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.2■□□□□ 0.34
SSNA1O43805 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SSNA1O43805 AC068587.7-201ENST00000641602 218 ntBASIC17.2■□□□□ 0.34
SSNA1O43805 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms