Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.52□□□□□ -0.25
RTL8CO15255 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTL8CO15255 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTL8CO15255 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC13.51□□□□□ -0.25
RTL8CO15255 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.51□□□□□ -0.25
RTL8CO15255 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.51□□□□□ -0.25
RTL8CO15255 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 MIR6786-201ENST00000616843 113 ntBASIC13.51□□□□□ -0.25
RTL8CO15255 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.51□□□□□ -0.25
RTL8CO15255 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC13.51□□□□□ -0.25
RTL8CO15255 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.51□□□□□ -0.25
RTL8CO15255 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTL8CO15255 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTL8CO15255 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.5□□□□□ -0.25
RTL8CO15255 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
RTL8CO15255 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC13.5□□□□□ -0.25
RTL8CO15255 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 FAM197Y1-201ENST00000421178 764 ntBASIC13.5□□□□□ -0.25
RTL8CO15255 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.5□□□□□ -0.25
RTL8CO15255 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.5□□□□□ -0.25
RTL8CO15255 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
RTL8CO15255 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.5□□□□□ -0.25
RTL8CO15255 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 AC145285.6-201ENST00000604632 637 ntBASIC13.5□□□□□ -0.25
RTL8CO15255 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTL8CO15255 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RTL8CO15255 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.49□□□□□ -0.25
RTL8CO15255 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.49□□□□□ -0.25
RTL8CO15255 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 KRT16P5-201ENST00000455284 522 ntBASIC13.49□□□□□ -0.25
RTL8CO15255 HES2-206ENST00000489730 730 ntTSL 2 BASIC13.49□□□□□ -0.25
RTL8CO15255 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.49□□□□□ -0.25
RTL8CO15255 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.49□□□□□ -0.25
RTL8CO15255 AC005363.2-201ENST00000618631 242 ntBASIC13.49□□□□□ -0.25
RTL8CO15255 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RTL8CO15255 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RTL8CO15255 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 AL353807.1-201ENST00000427475 662 ntBASIC13.48□□□□□ -0.25
RTL8CO15255 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.48□□□□□ -0.25
RTL8CO15255 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 AL121829.2-201ENST00000620908 328 ntBASIC13.48□□□□□ -0.25
RTL8CO15255 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RTL8CO15255 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC13.48□□□□□ -0.25
RTL8CO15255 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RTL8CO15255 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms