Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD9O15198 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SMAD9O15198 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
SMAD9O15198 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.3■□□□□ 0.52
SMAD9O15198 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 MCRIP2P1-201ENST00000394346 511 ntBASIC18.3■□□□□ 0.52
SMAD9O15198 SLC29A4P1-201ENST00000398760 971 ntBASIC18.3■□□□□ 0.52
SMAD9O15198 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SMAD9O15198 AL355472.2-201ENST00000422958 438 ntBASIC18.3■□□□□ 0.52
SMAD9O15198 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.3■□□□□ 0.52
SMAD9O15198 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.3■□□□□ 0.52
SMAD9O15198 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD9O15198 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SMAD9O15198 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.3■□□□□ 0.52
SMAD9O15198 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
SMAD9O15198 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD9O15198 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.3■□□□□ 0.52
SMAD9O15198 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.3■□□□□ 0.52
SMAD9O15198 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SMAD9O15198 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SMAD9O15198 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SMAD9O15198 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.29■□□□□ 0.52
SMAD9O15198 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.29■□□□□ 0.52
SMAD9O15198 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SMAD9O15198 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.29■□□□□ 0.52
SMAD9O15198 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.29■□□□□ 0.52
SMAD9O15198 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.29■□□□□ 0.52
SMAD9O15198 CYP2T3P-201ENST00000601990 817 ntBASIC18.29■□□□□ 0.52
SMAD9O15198 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.29■□□□□ 0.52
SMAD9O15198 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SMAD9O15198 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SMAD9O15198 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.29■□□□□ 0.52
SMAD9O15198 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
SMAD9O15198 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD9O15198 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.28■□□□□ 0.52
SMAD9O15198 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SMAD9O15198 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.28■□□□□ 0.52
SMAD9O15198 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 AC087633.2-202ENST00000565166 1439 ntBASIC18.28■□□□□ 0.52
SMAD9O15198 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SMAD9O15198 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SMAD9O15198 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SMAD9O15198 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
SMAD9O15198 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.27■□□□□ 0.52
SMAD9O15198 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SMAD9O15198 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.27■□□□□ 0.52
SMAD9O15198 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.27■□□□□ 0.52
SMAD9O15198 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.27■□□□□ 0.52
SMAD9O15198 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.27■□□□□ 0.52
SMAD9O15198 MIPEPP3-201ENST00000412105 444 ntBASIC18.27■□□□□ 0.52
SMAD9O15198 BX276092.2-201ENST00000417668 665 ntBASIC18.27■□□□□ 0.52
SMAD9O15198 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.27■□□□□ 0.52
SMAD9O15198 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.27■□□□□ 0.52
SMAD9O15198 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
SMAD9O15198 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SMAD9O15198 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SMAD9O15198 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SMAD9O15198 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SMAD9O15198 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms