Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC34.94■■■■□ 3.18
CUX2O14529 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC34.94■■■■□ 3.18
CUX2O14529 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC34.94■■■■□ 3.18
CUX2O14529 RN7SL510P-201ENST00000581311 263 ntBASIC34.94■■■■□ 3.18
CUX2O14529 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
CUX2O14529 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC34.93■■■■□ 3.18
CUX2O14529 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC34.93■■■■□ 3.18
CUX2O14529 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC34.93■■■■□ 3.18
CUX2O14529 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC34.93■■■■□ 3.18
CUX2O14529 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC34.93■■■■□ 3.18
CUX2O14529 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CUX2O14529 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
CUX2O14529 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC34.92■■■■□ 3.18
CUX2O14529 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC34.92■■■■□ 3.18
CUX2O14529 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
CUX2O14529 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC34.92■■■■□ 3.18
CUX2O14529 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC34.92■■■■□ 3.18
CUX2O14529 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC34.92■■■■□ 3.18
CUX2O14529 KRT8P45-201ENST00000414328 1447 ntBASIC34.92■■■■□ 3.18
CUX2O14529 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CUX2O14529 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC34.92■■■■□ 3.18
CUX2O14529 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC34.92■■■■□ 3.18
CUX2O14529 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
CUX2O14529 HMGA1P5-201ENST00000412453 271 ntBASIC34.91■■■■□ 3.18
CUX2O14529 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC34.91■■■■□ 3.18
CUX2O14529 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC34.91■■■■□ 3.18
CUX2O14529 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC34.91■■■■□ 3.18
CUX2O14529 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CUX2O14529 LTK-203ENST00000453182 2412 ntTSL 2 BASIC34.91■■■■□ 3.18
CUX2O14529 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CUX2O14529 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC34.91■■■■□ 3.18
CUX2O14529 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 AL022342.1-201ENST00000400363 863 ntBASIC34.9■■■■□ 3.18
CUX2O14529 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC34.9■■■■□ 3.18
CUX2O14529 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC34.9■■■■□ 3.18
CUX2O14529 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
CUX2O14529 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC34.9■■■■□ 3.18
CUX2O14529 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CUX2O14529 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC34.9■■■■□ 3.18
CUX2O14529 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC34.9■■■■□ 3.18
CUX2O14529 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC34.9■■■■□ 3.18
CUX2O14529 DGCR10-201ENST00000609839 495 ntBASIC34.9■■■■□ 3.18
CUX2O14529 CR392000.1-201ENST00000624770 1228 ntBASIC34.9■■■■□ 3.18
CUX2O14529 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
CUX2O14529 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC34.89■■■■□ 3.18
CUX2O14529 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC34.89■■■■□ 3.18
CUX2O14529 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
CUX2O14529 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC34.89■■■■□ 3.18
CUX2O14529 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC34.89■■■■□ 3.18
CUX2O14529 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
CUX2O14529 AC004264.1-201ENST00000608354 794 ntBASIC34.89■■■■□ 3.18
CUX2O14529 C11orf96-202ENST00000528572 1834 ntBASIC34.89■■■■□ 3.18
CUX2O14529 AC093323.1-202ENST00000635031 2045 ntBASIC34.89■■■■□ 3.18
CUX2O14529 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC34.88■■■■□ 3.18
CUX2O14529 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CUX2O14529 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CUX2O14529 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC34.88■■■■□ 3.17
CUX2O14529 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CUX2O14529 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC34.88■■■■□ 3.17
CUX2O14529 COMT-203ENST00000403184 2217 ntTSL 2 BASIC34.88■■■■□ 3.17
CUX2O14529 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
CUX2O14529 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
CUX2O14529 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC34.88■■■■□ 3.17
CUX2O14529 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CUX2O14529 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC34.87■■■■□ 3.17
CUX2O14529 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
CUX2O14529 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
CUX2O14529 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
CUX2O14529 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC34.87■■■■□ 3.17
CUX2O14529 NFE2L3P1-201ENST00000588207 1959 ntBASIC34.87■■■■□ 3.17
CUX2O14529 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC34.86■■■■□ 3.17
CUX2O14529 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
CUX2O14529 INGX-201ENST00000359239 846 ntBASIC34.86■■■■□ 3.17
CUX2O14529 MESTP1-201ENST00000404287 994 ntBASIC34.86■■■■□ 3.17
CUX2O14529 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC34.86■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms