Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 AL591742.1-201ENST00000604433 565 ntBASIC19.72■□□□□ 0.75
E2F3O00716 AC011767.1-201ENST00000617410 1153 ntBASIC19.72■□□□□ 0.75
E2F3O00716 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.72■□□□□ 0.75
E2F3O00716 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E2F3O00716 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.71■□□□□ 0.75
E2F3O00716 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
E2F3O00716 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
E2F3O00716 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.71■□□□□ 0.75
E2F3O00716 KRT18P11-201ENST00000435214 1283 ntBASIC19.71■□□□□ 0.75
E2F3O00716 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.71■□□□□ 0.75
E2F3O00716 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
E2F3O00716 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.71■□□□□ 0.75
E2F3O00716 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
E2F3O00716 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
E2F3O00716 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
E2F3O00716 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 DPP3P2-201ENST00000416030 1696 ntBASIC19.71■□□□□ 0.75
E2F3O00716 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
E2F3O00716 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E2F3O00716 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
E2F3O00716 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
E2F3O00716 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.7■□□□□ 0.74
E2F3O00716 AC007322.4-201ENST00000509611 723 ntBASIC19.7■□□□□ 0.74
E2F3O00716 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.7■□□□□ 0.74
E2F3O00716 AL162412.1-201ENST00000567129 965 ntBASIC19.7■□□□□ 0.74
E2F3O00716 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.7■□□□□ 0.74
E2F3O00716 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
E2F3O00716 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
E2F3O00716 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.7■□□□□ 0.74
E2F3O00716 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 AC087633.2-202ENST00000565166 1439 ntBASIC19.69■□□□□ 0.74
E2F3O00716 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
E2F3O00716 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 AC013268.1-206ENST00000638368 961 ntBASIC19.69■□□□□ 0.74
E2F3O00716 AC112229.1-201ENST00000639295 961 ntBASIC19.69■□□□□ 0.74
E2F3O00716 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.69■□□□□ 0.74
E2F3O00716 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
E2F3O00716 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.69■□□□□ 0.74
E2F3O00716 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.69■□□□□ 0.74
E2F3O00716 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
E2F3O00716 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
E2F3O00716 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
E2F3O00716 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
E2F3O00716 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
E2F3O00716 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
E2F3O00716 CYP21A1P-202ENST00000354927 1481 ntBASIC19.68■□□□□ 0.74
E2F3O00716 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.68■□□□□ 0.74
E2F3O00716 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E2F3O00716 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.68■□□□□ 0.74
E2F3O00716 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.68■□□□□ 0.74
E2F3O00716 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.68■□□□□ 0.74
E2F3O00716 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.68■□□□□ 0.74
E2F3O00716 MFSD11-216ENST00000590393 1141 ntBASIC19.68■□□□□ 0.74
E2F3O00716 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms