Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA2A8K830 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA2A8K830 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.61■□□□□ 0.09
COLCA2A8K830 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COLCA2A8K830 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.6■□□□□ 0.09
COLCA2A8K830 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA2A8K830 AC092720.2-201ENST00000602388 1665 ntBASIC15.6■□□□□ 0.09
COLCA2A8K830 OR7E47P-201ENST00000546390 1422 ntBASIC15.6■□□□□ 0.09
COLCA2A8K830 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.6■□□□□ 0.09
COLCA2A8K830 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
COLCA2A8K830 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.6■□□□□ 0.09
COLCA2A8K830 MKRN4P-201ENST00000444706 1521 ntBASIC15.6■□□□□ 0.09
COLCA2A8K830 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA2A8K830 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA2A8K830 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.6■□□□□ 0.09
COLCA2A8K830 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
COLCA2A8K830 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.6■□□□□ 0.09
COLCA2A8K830 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
COLCA2A8K830 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COLCA2A8K830 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
COLCA2A8K830 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.59■□□□□ 0.09
COLCA2A8K830 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
COLCA2A8K830 DUX4L4-201ENST00000566884 1269 ntBASIC15.59■□□□□ 0.09
COLCA2A8K830 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.59■□□□□ 0.09
COLCA2A8K830 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COLCA2A8K830 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
COLCA2A8K830 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.59■□□□□ 0.09
COLCA2A8K830 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.59■□□□□ 0.09
COLCA2A8K830 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
COLCA2A8K830 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COLCA2A8K830 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC15.58■□□□□ 0.09
COLCA2A8K830 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
COLCA2A8K830 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
COLCA2A8K830 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 AC003102.1-202ENST00000563394 1796 ntBASIC15.58■□□□□ 0.08
COLCA2A8K830 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.58■□□□□ 0.08
COLCA2A8K830 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
COLCA2A8K830 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
COLCA2A8K830 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.58■□□□□ 0.08
COLCA2A8K830 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.58■□□□□ 0.08
COLCA2A8K830 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.57■□□□□ 0.08
COLCA2A8K830 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COLCA2A8K830 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COLCA2A8K830 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COLCA2A8K830 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
COLCA2A8K830 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
COLCA2A8K830 DUX4L29-201ENST00000425409 679 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms