Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.49■□□□□ 0.87
CAPN8A6NHC0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 KRT17P1-201ENST00000399211 1546 ntBASIC20.48■□□□□ 0.87
CAPN8A6NHC0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 KRT18P68-201ENST00000392293 1000 ntBASIC20.48■□□□□ 0.87
CAPN8A6NHC0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 AC105020.6-201ENST00000621523 1217 ntBASIC20.48■□□□□ 0.87
CAPN8A6NHC0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CAPN8A6NHC0 LINC01006-201ENST00000333319 2292 ntBASIC20.47■□□□□ 0.87
CAPN8A6NHC0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 AC092118.2-201ENST00000613495 667 ntBASIC20.47■□□□□ 0.87
CAPN8A6NHC0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 AL356652.1-201ENST00000615962 565 ntBASIC20.47■□□□□ 0.87
CAPN8A6NHC0 AL589743.5-201ENST00000616611 1050 ntBASIC20.47■□□□□ 0.87
CAPN8A6NHC0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CAPN8A6NHC0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 AL138781.1-201ENST00000566567 1274 ntBASIC20.46■□□□□ 0.87
CAPN8A6NHC0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CAPN8A6NHC0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CAPN8A6NHC0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 LSM12P1-201ENST00000411836 588 ntBASIC20.45■□□□□ 0.86
CAPN8A6NHC0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CAPN8A6NHC0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN8A6NHC0 KRT8P36-201ENST00000489121 1440 ntBASIC20.44■□□□□ 0.86
CAPN8A6NHC0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CAPN8A6NHC0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN8A6NHC0 AC007225.1-201ENST00000566331 1836 ntBASIC20.44■□□□□ 0.86
CAPN8A6NHC0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN8A6NHC0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CAPN8A6NHC0 FP700111.2-201ENST00000619190 1892 ntBASIC20.44■□□□□ 0.86
CAPN8A6NHC0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms