Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 AC092171.4-201ENST00000609130 632 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MIR6724-1-201ENST00000616420 92 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MIR6724-2-201ENST00000616483 92 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MIR6724-4-201ENST00000617390 92 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MIR6724-3-201ENST00000622482 92 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01546A6NGU7 AL390961.4-201ENST00000623958 2535 ntBASIC14.3□□□□□ -0.12
LINC01546A6NGU7 AC007613.1-201ENST00000572811 2597 ntBASIC14.29□□□□□ -0.12
LINC01546A6NGU7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LINC01546A6NGU7 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 EEF1DP3-203ENST00000566025 782 ntBASIC14.28□□□□□ -0.12
LINC01546A6NGU7 AC061975.6-201ENST00000579045 1553 ntBASIC14.28□□□□□ -0.12
LINC01546A6NGU7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 HSD17B1P1-201ENST00000590052 955 ntBASIC14.28□□□□□ -0.12
LINC01546A6NGU7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 AC053503.5-201ENST00000601508 636 ntBASIC14.28□□□□□ -0.12
LINC01546A6NGU7 MIR4787-201ENST00000607364 84 ntBASIC14.28□□□□□ -0.12
LINC01546A6NGU7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.28□□□□□ -0.12
LINC01546A6NGU7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC14.27□□□□□ -0.12
LINC01546A6NGU7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms