Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 AC010141.3-201ENST00000456659 717 ntBASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 Z92544.1-202ENST00000571933 1220 ntBASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 AC011484.1-201ENST00000377652 1995 ntBASIC15.96■□□□□ 0.15
RBFOX3A6NFN3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RBFOX3A6NFN3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 AC020916.1-201ENST00000587762 1774 ntBASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 AP006587.3-201ENST00000525742 1516 ntBASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 PVT1_1.1-201ENST00000615125 194 ntBASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RBFOX3A6NFN3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 AL451085.2-201ENST00000605085 799 ntBASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 AC133637.1-201ENST00000624115 1537 ntBASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RBFOX3A6NFN3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 TREX1-205ENST00000625293 1783 ntBASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
RBFOX3A6NFN3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms