Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC020907.5-201ENST00000624372 1936 ntBASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TCRBV4S1A1TA0A5B7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TSPY20P-201ENST00000450910 630 ntBASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 RARRES2P4-201ENST00000514074 484 ntBASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC098934.4-201ENST00000564127 592 ntBASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TMEM191A-211ENST00000637163 1067 ntBASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TCRBV4S1A1TA0A5B7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FAM201B-201ENST00000458407 597 ntBASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CDV3P1-201ENST00000471403 739 ntBASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TCRBV4S1A1TA0A5B7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.21■□□□□ 0.18
TCRBV4S1A1TA0A5B7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
TCRBV4S1A1TA0A5B7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.21■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC092118.2-201ENST00000613495 667 ntBASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TCRBV4S1A1TA0A5B7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms