Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 DPP3P2-201ENST00000416030 1696 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 AC099791.1-201ENST00000416440 715 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 AC093484.2-201ENST00000580996 2166 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 AC008764.7-201ENST00000593779 1081 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 AL136162.1-201ENST00000607711 1078 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 AC135279.3-201ENST00000610945 1311 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 BX119927.1-201ENST00000636596 1552 ntBASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.28□□□□□ -0.12
TRBV27A0A0K0K1C4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 TREX1-205ENST00000625293 1783 ntBASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 KRT8P36-201ENST00000489121 1440 ntBASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV27A0A0K0K1C4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 AL136116.3-201ENST00000402907 1138 ntBASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV27A0A0K0K1C4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC012414.1-201ENST00000556676 535 ntBASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 AC138907.5-202ENST00000569484 235 ntBASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV27A0A0K0K1C4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 KRT87P-202ENST00000534226 1464 ntBASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV27A0A0K0K1C4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms