Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 KRT8P36-201ENST00000489121 1440 ntBASIC20.1■□□□□ 0.81
CCDC163A0A0D9SF12 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 AC124283.5-201ENST00000624661 1809 ntBASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 NIFKP9-201ENST00000419265 221 ntBASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 AC010947.1-201ENST00000623454 693 ntBASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC163A0A0D9SF12 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 SLC25A3P1-201ENST00000443844 931 ntBASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC163A0A0D9SF12 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC163A0A0D9SF12 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 KRT16P1-201ENST00000399124 1418 ntBASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC163A0A0D9SF12 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 CYP2D8P-201ENST00000433633 1490 ntBASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 KRT18P57-201ENST00000443599 1254 ntBASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC163A0A0D9SF12 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
CCDC163A0A0D9SF12 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC163A0A0D9SF12 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC163A0A0D9SF12 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms