Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-4A0A0C4DH59 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.96■□□□□ 0.79
TRBV5-4A0A0C4DH59 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC069152.1-201ENST00000438030 544 ntBASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-4A0A0C4DH59 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC023632.3-201ENST00000521633 145 ntBASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC133041.1-202ENST00000642053 222 ntBASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC099778.1-201ENST00000568593 1911 ntBASIC19.94■□□□□ 0.78
TRBV5-4A0A0C4DH59 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-4A0A0C4DH59 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC097658.1-201ENST00000475555 843 ntBASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AL031963.3-201ENST00000606441 850 ntBASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 AC083880.1-201ENST00000608266 535 ntBASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV5-4A0A0C4DH59 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms