Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PNMA6B-201ENST00000538162 1200 ntBASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 ERF-202ENST00000440177 2032 ntTSL 2 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC14.61□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC005229.4-201ENST00000610085 2198 ntBASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 KRT8P36-201ENST00000489121 1440 ntBASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM191A-211ENST00000637163 1067 ntBASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
IGHV4-28A0A0C4DH34 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC007375.3-201ENST00000600936 2314 ntBASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 AP003097.1-201ENST00000530657 1135 ntBASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
IGHV4-28A0A0C4DH34 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGHV4-28A0A0C4DH34 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGHV4-28A0A0C4DH34 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
IGHV4-28A0A0C4DH34 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC14.58□□□□□ -0.07
IGHV4-28A0A0C4DH34 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.58□□□□□ -0.07
IGHV4-28A0A0C4DH34 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 KRT18P29-201ENST00000397031 1267 ntBASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC026366.1-201ENST00000488803 879 ntBASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 AC006128.1-201ENST00000624704 1661 ntBASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.58□□□□□ -0.08
IGHV4-28A0A0C4DH34 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.57□□□□□ -0.08
IGHV4-28A0A0C4DH34 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms