Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV4A0A0B4J268 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 PGM5P4-201ENST00000421970 445 ntBASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 TERF1P5-201ENST00000477545 1207 ntBASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC137761.2-201ENST00000561729 223 ntBASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC145350.3-201ENST00000569033 163 ntBASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 AC010536.3-201ENST00000620306 533 ntBASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV4A0A0B4J268 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 AL591742.1-201ENST00000604433 565 ntBASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV4A0A0B4J268 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV4A0A0B4J268 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 AC016769.1-201ENST00000409132 1010 ntBASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 AC013268.1-206ENST00000638368 961 ntBASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 AC112229.1-201ENST00000639295 961 ntBASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV4A0A0B4J268 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms