Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AC027612.3-201ENST00000413684 1047 ntBASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AC105265.2-201ENST00000467189 838 ntBASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AC079140.4-201ENST00000507448 529 ntBASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 EEF1DP3-203ENST00000566025 782 ntBASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 AC008175.2-201ENST00000612840 297 ntBASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV8-4A0A0B4J246 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 MIR638-201ENST00000385237 100 ntBASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 POU5F1P4-201ENST00000413175 1085 ntBASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAV8-4A0A0B4J246 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 KRT87P-202ENST00000534226 1464 ntBASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 FER1L4-210ENST00000615531 5998 ntBASIC14.11□□□□□ -0.15
TRAV8-4A0A0B4J246 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 LINC02228-203ENST00000641970 1355 ntBASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 AC120498.10-201ENST00000621827 505 ntBASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 AP004607.4-201ENST00000530158 1459 ntBASIC14.1□□□□□ -0.15
TRAV8-4A0A0B4J246 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms