Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC187A0A096LP49 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 NBPF21P-201ENST00000425093 1451 ntBASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 GUSBP5-202ENST00000510805 1989 ntBASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 RCN1P1-201ENST00000400413 996 ntBASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 CD177P1-201ENST00000606252 935 ntBASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 AC011484.1-201ENST00000377652 1995 ntBASIC19.23■□□□□ 0.67
CCDC187A0A096LP49 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 AL353708.3-201ENST00000610272 989 ntBASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 AL121906.2-201ENST00000621597 723 ntBASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC187A0A096LP49 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 MMP23A-201ENST00000234610 1017 ntBASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC187A0A096LP49 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC187A0A096LP49 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC187A0A096LP49 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms